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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Heterogeneous nuclear ribonucleoprotein D0

UniprotKB/SwissProt ID: HNRPD_MOUSE (Q60668)

Gene Name: Hnrnpd

Synonyms: Auf1, Hnrpd

Organism: Mus musculus (Mouse).

Function: Binds with high affinity to RNA molecules that contain AU-rich elements (AREs) found within the 3'-UTR of many proto- oncogenes and cytokine mRNAs. Also binds to double- and single- stranded DNA sequences in a specific manner and functions a transcription factor. Each of the RNA-binding domains specifically can bind solely to a single-stranded non-monotonous 5'-UUAG-3' sequence and also weaker to the single-stranded 5'-TTAGGG-3' telomeric DNA repeat. Binds RNA oligonucleotides with 5'-UUAGGG-3' repeats more tightly than the telomeric single-stranded DNA 5'- TTAGGG-3' repeats. Binding of RRM1 to DNA inhibits the formation of DNA quadruplex structure which may play a role in telomere elongation. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity).

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus (By similarity). Cytoplasm (By similarity). Note=Localized in cytoplasmic mRNP granules containing untranslated mRNAs. Component of ribonucleosomes (By similarity).

Graphical Visualization of S-nitrosylation Sites:
Overview of Protein S-nitrosylation Sites with Functional and Structural Information
InterPro ID Domain
IPR000504
IPR012677

The S-nitrosylation sites of HNRPD_MOUSE

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site Substrate Motifs PubMed ID Experiment
1126YFSKFGEVVD C TLKLDPITGR HHHHCCCEEE E EEEECCCCCC 3.03%MC0120925432in vivo
2126YFSKFGEVVD C TLKLDPITGR HHHHCCCEEE E EEEECCCCCC 3.03%MC0121278135in vitro
3226DNKTNKRRGF C FITFKEEEPV CCCCCCCCCE E EEEECCHHHH 2.41%MC0420925432in vivo
4226DNKTNKRRGF C FITFKEEEPV CCCCCCCCCE E EEEECCHHHH 2.41%MC0421278135in vitro