dbSNO 2.0

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

Protein Name: Isopentenyl-diphosphate Delta-isomerase 1

UniprotKB/SwissProt ID: IDI1_HUMAN (Q13907)

Gene Name: IDI1

Organism: Homo sapiens (Human).

Function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Peroxisome.

PDB :
( If your security settings prevent Jmol from running, please register http://140.138.144.145/ as a safe location in your Java settings. )

Network with metabolic pathway:

Kegg map ID	Pathway	Link
map00900	Terpenoid backbone biosynthesis

Graphical Visualization of S-nitrosylation Sites:

Overview of Protein S-nitrosylation Sites with Functional and Structural Information

InterPro ID	Domain
IPR000086
IPR002667
IPR011876
IPR015797

3D Structure Databases:


3D structure databases
Entry	Method	Resolution (A)	Chain	Positions	View
2DHO	X-ray	1.60 A	A	1-227	Link
2I6K	X-ray	2.00 A	A/B	1-227	Link
2ICJ	X-ray	1.70 A	A	1-227	Link
2ICK	X-ray	1.93 A	A	1-227	Link

The S-nitrosylation sites of IDI1_HUMAN

No.	Position	S-nitrosylated Peptide	Secondary Structure of S-nitrosylated Peptide	Solvent Accessibility of nitrosylated Site	Substrate Motifs	PubMed ID	Experiment
1	172	NPDPNEIKSY C YVSKEELKEL	CCCHHHHHHH C CCCHHHHHHH	3.31%	HC04	19483679	in vivo

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