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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Calcium/calmodulin-dependent protein kinase type II subunit delta

UniprotKB/SwissProt ID: KCC2D_HUMAN (Q13557)

Gene Name: CAMK2D

Synonyms: CAMKD

Organism: Homo sapiens (Human).

Function: Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarcoplasmic reticulum (SR), SR Ca(2+) uptake and Na(+) and K(+) channel transport. Targets also transcription factors and signaling molecules to regulate heart function. In its activated form, is involved in the pathogenesis of dilated cardiomyopathy and heart failure. Contributes to cardiac decompensation and heart failure by regulating SR Ca(2+) release via direct phosphorylation of RYR2 Ca(2+) channel on 'Ser- 2808'. In the nucleus, phosphorylates the MEF2 repressor HDAC4, promoting its nuclear export and binding to 14-3-3 protein, and expression of MEF2 and genes involved in the hypertrophic program. Is essential for left ventricular remodeling responses to myocardial infarction. In pathological myocardial remodeling acts downstream of the beta adrenergic receptor signaling cascade to regulate key proteins involved in ECC. Regulates Ca(2+) influx to myocytes by binding and phosphorylating the L-type Ca(2+) channel subunit beta-2 CACNB2. In addition to Ca(2+) channels, can target and regulate the cardiac sarcolemmal Na(+) channel Nav1.5/SCN5A and the K+ channel Kv4.3/KCND3, which contribute to arrhythmogenesis in heart failure. Phosphorylates phospholamban (PLN/PLB), an endogenous inhibitor of SERCA2A/ATP2A2, contributing to the enhancement of SR Ca(2+) uptake that may be important in frequency-dependent acceleration of relaxation (FDAR) and maintenance of contractile function during acidosis. May participate in the modulation of skeletal muscle function in response to exercise, by regulating SR Ca(2+) transport through phosphorylation of PLN/PLB and triadin, a ryanodine receptor- coupling factor.

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Cell membrane, sarcolemma; Peripheral membrane protein; Cytoplasmic side (Probable). Sarcoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (Probable).

PDB :
( If your security settings prevent Jmol from running, please register http://140.138.144.145/ as a safe location in your Java settings. )

Protein disease:
Disease database Database Entry Disease information
OMIM607708CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE II-DELTA; CAMK2D
Network with metabolic pathway:
Kegg map ID Pathway Link
map04720Long-term potentiation
map04740Olfactory transduction
map04066HIF-1 signaling pathway
map04722Neurotrophin signaling pathway
map04725Cholinergic synapse
map04728Dopaminergic synapse
map04912GnRH signaling pathway
map04971Gastric acid secretion
map05031Amphetamine addiction
map05214Glioma
map04012ErbB signaling pathway
map04020Calcium signaling pathway
map04114Oocyte meiosis
map04310Wnt signaling pathway
map04916Melanogenesis
map05152Tuberculosis
Graphical Visualization of S-nitrosylation Sites:
Overview of Protein S-nitrosylation Sites with Functional and Structural Information
InterPro ID Domain
IPR000719
IPR002290
IPR008271
IPR011009
IPR013543
IPR015742

3D Structure Databases:
3D structure databases
EntryMethodResolution (A)ChainPositionsView
2VN9 X-ray 2.30 A A/B11-309Link
2W2C X-ray 2.70 A A/B/C/D/E/F/G/H/I/J/K/L/M/N334-475Link
2WEL X-ray 1.90 A A11-335Link
3GP2 X-ray 1.46 A B294-311Link

The S-nitrosylation sites of KCC2D_HUMAN

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site Substrate Motifs PubMed ID Experiment
1373NGDFEAYTKI C DPGLTAFEPE HHHHHCCCCC C CCCHHHHHHH 5.71%HC0321278135in vitro