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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Polypyrimidine tract-binding protein 1

UniprotKB/SwissProt ID: PTBP1_HUMAN (P26599)

Gene Name: PTBP1

Synonyms: PTB

Organism: Homo sapiens (Human).

Function: Plays a role in pre-mRNA splicing and in the regulation of alternative splicing events. Activates exon skipping of its own pre-mRNA during muscle cell differentiation. Binds to the polypyrimidine tract of introns. May promote RNA looping when bound to two separate polypyrimidine tracts in the same pre-mRNA. May promote the binding of U2 snRNP to pre-mRNA. Cooperates with RAVER1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre-mRNA. Represses the splicing of MAPT/Tau exon 10.

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus.

PDB :
( If your security settings prevent Jmol from running, please register http://140.138.144.145/ as a safe location in your Java settings. )

Graphical Visualization of S-nitrosylation Sites:
Overview of Protein S-nitrosylation Sites with Functional and Structural Information
InterPro ID Domain
IPR000504
IPR006536
IPR012677

3D Structure Databases:
3D structure databases
EntryMethodResolution (A)ChainPositionsView
1QM9 NMR - A335-531Link
1SJQ NMR - A55-147Link
1SJR NMR - A147-301Link
2AD9 NMR - A49-146Link
2ADB NMR - A172-298Link
2ADC NMR - A324-531Link
2EVZ NMR - A324-531Link
3ZZY X-ray 1.40 A A/B156-285Link
3ZZZ X-ray 1.55 A A/B156-285Link

The S-nitrosylation sites of PTBP1_HUMAN

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site Substrate Motifs PubMed ID Experiment
1250SLDGQNIYNA C CTLRIDFSKL HHCCCCCCCC C CEEEEEECCC 1.30%HC0819483679in vivo
2251LDGQNIYNAC C TLRIDFSKLT HCCCCCCCCC C EEEEEECCCC 3.59%HC0619483679in vivo