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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Voltage-dependent anion-selective channel protein 1

UniprotKB/SwissProt ID: VDAC1_MOUSE (Q60932)

Gene Name: Vdac1

Synonyms: Vdac5

Organism: Mus musculus (Mouse).

Function: Forms a channel through the mitochondrial outer membrane and also the plasma membrane. The channel at the outer mitochondrial membrane allows diffusion of small hydrophilic molecules; in the plasma membrane it is involved in cell volume regulation and apoptosis. It adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective. May participate in the formation of the permeability transition pore complex (PTPC) responsible for the release of mitochondrial products that triggers apoptosis.

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Isoform Mt-VDAC1: Mitochondrion outer membrane; Multi-pass membrane protein. Isoform Pl-VDAC1: Cell membrane; Multi-pass membrane protein.

PDB :
( If your security settings prevent Jmol from running, please register http://140.138.144.145/ as a safe location in your Java settings. )

Network with metabolic pathway:
Kegg map ID Pathway Link
map04020Calcium signaling pathway
map05012Parkinson's disease
map05016Huntington's disease
map05164Influenza A
map05166HTLV-I infection
Graphical Visualization of S-nitrosylation Sites:
Overview of Protein S-nitrosylation Sites with Functional and Structural Information
InterPro ID Domain
IPR001925

3D Structure Databases:
3D structure databases
EntryMethodResolution (A)ChainPositionsView
3EMN X-ray 2.30 A X14-296Link

The S-nitrosylation sites of VDAC1_MOUSE

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site Substrate Motifs PubMed ID Experiment
1140GYKREHINLG C DVDFDIAGPS EEECCCCCCE E EEEEECCCCE 5.33%MC0124895380-
2140GYKREHINLG C DVDFDIAGPS EEECCCCCCE E EEEEECCCCE 5.33%MC0121278135in vitro
3140GYKREHINLG C DVDFDIAGPS EEECCCCCCE E EEEEECCCCE 5.33%MC0122865876in vivo
4245AAKYQVDPDA C FSAKVNNSSL EEEECCCCCC E EEEEEECCEE 3.45%MC0722588120-
5245AAKYQVDPDA C FSAKVNNSSL EEEECCCCCC E EEEEEECCEE 3.45%MC0724895380-
6245AAKYQVDPDA C FSAKVNNSSL EEEECCCCCC E EEEEEECCEE 3.45%MC0721278135in vitro
7245AAKYQVDPDA C FSAKVNNSSL EEEECCCCCC E EEEEEECCEE 3.45%MC0722865876in vivo