logo
  Home | Contact us | Browse | Quick Search by UniProtKB ID, Keyword, PDBID

Menu:

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

Read more...


Protein Name: Vinculin

UniprotKB/SwissProt ID: VINC_HUMAN (P18206)

Gene Name: VCL

Organism: Homo sapiens (Human).

Function: Actin filament (F-actin)-binding protein involved in cell-matrix adhesion and cell-cell adhesion. Regulates cell- surface E-cadherin expression and potentiates mechanosensing by the E-cadherin complex. May also play important roles in cell morphology and locomotion.

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Cytoplasm, cytoskeleton. Cell junction, adherens junction. Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cell junction, focal adhesion. Note=Cytoplasmic face of adhesion plaques. Recruitment to cell-cell junctions occurs in a myosin II-de

PDB :
( If your security settings prevent Jmol from running, please register http://140.138.144.145/ as a safe location in your Java settings. )

Protein disease:
Disease database Database Entry Disease information
KEGGH00292 Hypertrophic cardiomyopathy (HCM)
KEGGH00294 Dilated cardiomyopathy (DCM)
OMIM193065VINCULIN; VCL METAVINCULIN, INCLUDED
OMIM611407CARDIOMYOPATHY, DILATED, 1W; CMD1W
OMIM613255CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 15; CMH15
Network with metabolic pathway:
Kegg map ID Pathway Link
map05131Shigellosis
map04520Adherens junction
map04670Leukocyte transendothelial migration
map05100Bacterial invasion of epithelial cells
map05146Amoebiasis
map04510Focal adhesion
map04810Regulation of actin cytoskeleton
Graphical Visualization of S-nitrosylation Sites:
Overview of Protein S-nitrosylation Sites with Functional and Structural Information
InterPro ID Domain
IPR000633
IPR006077

3D Structure Databases:
3D structure databases
EntryMethodResolution (A)ChainPositionsView
1RKC X-ray 2.70 A A1-258Link
1RKE X-ray 2.35 A A1-258Link
B882-1134
1SYQ X-ray 2.42 A A1-258Link
1TR2 X-ray 2.90 A A/B1-1134Link
1YDI X-ray 1.80 A A1-258Link
2GWW X-ray 2.72 A A1-257Link
2HSQ X-ray 3.97 A A2-257Link
2IBF X-ray 3.20 A A1-258Link
3H2U X-ray 2.75 A A/C879-1134Link
3H2V X-ray 2.90 A A/B/C/D879-1134Link
3MYI X-ray 2.20 A A959-1130Link
3RF3 X-ray 1.61 A A/B1-258Link
3S90 X-ray 1.97 A A/B1-252Link
3TJ5 X-ray 1.99 A A1-255Link
3TJ6 X-ray 2.76 A A1-257Link
3VF0 X-ray 2.54 A A856-1134Link
4DJ9 X-ray 2.25 A A1-258Link
4EHP X-ray 2.66 A A1-252Link

The S-nitrosylation sites of VINC_HUMAN

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site Substrate Motifs PubMed ID Experiment
185PPAFIKVENA C TKLVQAAQML HHHHHHHHHH H HHHHHHHHHH 5.34%HC0522178444-
285PPAFIKVENA C TKLVQAAQML HHHHHHHHHH H HHHHHHHHHH 5.34%HC0516648260in vivo
3545GPYRQDLLAK C DRVDQLTAQL HHHHHHHHHH H HHHHHHHHHH 3.16%HC0125040305in vivo
41053KRIRTNLLQV C ERIPTISTQL HHHHHHHHHH H HHHHHHHHHH 1.55%HC012212679
(Cys985)
in vitro
51053KRIRTNLLQV C ERIPTISTQL HHHHHHHHHH H HHHHHHHHHH 1.55%HC0125040305in vivo