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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

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Protein Name: Vacuolar protein sorting-associated protein VTA1 homolog

UniprotKB/SwissProt ID: VTA1_HUMAN (Q9NP79)

Gene Name: VTA1

Synonyms: C6orf55

Organism: Homo sapiens (Human).

Function: Involved in the endosomal multivesicular bodies (MVB) pathway. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. Thought to be a cofactor of VPS4A/B, which catalyzes disassembles membrane-associated ESCRT-III assemblies. Involved in the sorting and down-regulation of EGFR (By similarity). Involved in HIV-1 budding.

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Cytoplasm. Endosome membrane; Peripheral membrane protein (Probable).

Protein disease:
Disease database Database Entry Disease information
OMIM610902CHROMOSOME 6 OPEN READING FRAME 55; C6ORF55 ;;SKD1-BINDING PROTEIN 1; SBP1;; LYST-INTERACTIN
Network with metabolic pathway:
Kegg map ID Pathway Link
map04144Endocytosis
Graphical Visualization of S-nitrosylation Sites:
Overview of Protein S-nitrosylation Sites with Functional and Structural Information
InterPro ID Domain
IPR006745

3D Structure Databases:
3D structure databases
EntryMethodResolution (A)ChainPositionsView
2LXL NMR - A1-183Link
2LXM NMR - A1-168Link

The S-nitrosylation sites of VTA1_HUMAN

No. Position S-nitrosylated Peptide Secondary Structure of S-nitrosylated Peptide Solvent Accessibility of nitrosylated Site Substrate Motifs PubMed ID Experiment
1155ARWKATYIHN C LKNGETPQAG HHHHHHHHHH H HHCCCCCCCC 3.37%HC0319483679in vivo