dbSNO

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

PDB ID: 1HD1
Chain: A
Site: 126


	PTM	Style	Surface	Display
SNO: A_126
Flank: A_120~132
Other chain
Other site
All protein
Other Function
Chain		B-factor
Charge		Ligand

	PDB site	Amino Acid	Distance(A)	Secondary Structure	Accessible surface area	Side Chian Angle
-6	120	F	>10	C	23	-
	121	G	>10	C	19	-
	122	E	>10	C	128	-
	123	V	7.786	E	28
	124	V	8.853	E	92	-
	125	D	6.133	E	84	-
Center	126	C	-	E	5	-
+6	127	T	4.852	E	74	-
	128	L	6.411	E	19	-
	129	K	>10	E	75	-
	130	L	>10	E	6	-
	131	D	>10	E	48	-
	132	P	>10	C	61	-
Other site of 19	114	K	3.614	H	83	-
	110	K	4.082	H	108
	113	L	4.314	H	0
	143	V	4.654	E	0	-
	142	F	5.988	E	53	-
	111	K	6.197	H	147	-
	109	T	7.008	C	53	-
	141	G	7.075	E	0	-
	144	L	7.082	E	35	-
	117	F	7.205	H	0
	112	D	7.211	H	52	-
	115	D	7.342	H	111	-
	116	Y	8.132	H	69	-
	101	I	8.681	E	0
	145	F	8.943	E	16
	118	S	9.057	H	67	-
	108	T	9.182	C	5	-
	100	F	9.714	E	54	-
	99	M	9.852	E	2

Show

Neighbor Amino Acid Top 3
Distance(A)	PDB site	Amino Acid	Secondary Structure	Accessible surface area	Side Chian Angle	Single
3.614	114	K	H	83
4.082	110	K	H	108
4.314	113	L	H	0

TOP 3

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Modified residue	71	-55	Outside Of PDB File	Phosphoserine
Modified residue	80	-46	Outside Of PDB File	Phosphoserine
Modified residue	82	-44	Outside Of PDB File	Phosphoserine
Modified residue	83	-43	Outside Of PDB File	Phosphoserine
Modified residue	119	-7		N6-methyllysine
Modified residue	165	39		N6-acetyllysine
Modified residue	190	64	Outside Of PDB File	Phosphoserine
Modified residue	193	67	Outside Of PDB File	Phosphothreonine
Modified residue	251	125	Outside Of PDB File	N6-acetyllysine
Modified residue	345	219	Outside Of PDB File	Dimethylated arginine

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