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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1IBR
Chain: A
Site: 112
Chain: A
Site: 112
| PTM | Style | Surface | Display | SNO: A_112 |
| Flank: A_106~118 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 106 | R | >10 | H | 55 | - |
| 107 | D | 8.294 | H | 15 | - | |
| 108 | L | 5.107 | H | 0 | - | |
| 109 | V | 6.121 | H | 57 | - | |
| 110 | R | 7.377 | C | 13 | - | |
| 111 | V | 4.569 | C | 21 | ||
| Center | 112 | C | - | C | 7 | - |
| +6 | 113 | E | 6.381 | C | 100 | - |
| 114 | N | 8.093 | C | 120 | - | |
| 115 | I | 6.935 | C | 30 | ||
| 116 | P | 9.728 | C | 17 | - | |
| 117 | I | 9.695 | E | 9 | ||
| 118 | V | >10 | E | 0 | - | |
| Other site of 14 | 80 | Y | 4.631 | H | 4 | - |
| 83 | A | 4.724 | C | 8 | ||
| 81 | I | 5.755 | C | 2 | - | |
| 82 | Q | 5.946 | C | 97 | - | |
| 84 | Q | 6.693 | C | 86 | - | |
| 85 | C | 7.265 | E | 0 | - | |
| 86 | A | 7.838 | E | 0 | ||
| 14 | V | 7.979 | E | 0 | ||
| 79 | Y | 8.464 | H | 4 | - | |
| 77 | D | 8.698 | H | 5 | - | |
| 13 | L | 9.017 | E | 0 | - | |
| 78 | G | 9.328 | H | 6 | - | |
| 12 | K | 9.436 | E | 18 | ||
| 105 | H | 9.918 | H | 19 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.569 | 111 | V | C | 21 | ||
| 4.631 | 80 | Y | H | 4 | ||
| 4.724 | 83 | A | C | 8 | ||
| TOP 3 |