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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1IBR
Chain: C
Site: 112
Chain: C
Site: 112
| PTM | Style | Surface | Display | SNO: C_112 |
| Flank: C_106~118 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 106 | R | >10 | H | 51 | - |
| 107 | D | 8.303 | H | 13 | - | |
| 108 | L | 5.138 | H | 0 | - | |
| 109 | V | 6.147 | H | 61 | - | |
| 110 | R | 7.379 | C | 11 | - | |
| 111 | V | 4.573 | C | 20 | ||
| Center | 112 | C | - | C | 7 | - |
| +6 | 113 | E | 6.375 | C | 101 | - |
| 114 | N | 8.11 | C | 119 | - | |
| 115 | I | 6.949 | C | 27 | ||
| 116 | P | 9.742 | C | 17 | - | |
| 117 | I | 9.719 | E | 10 | ||
| 118 | V | >10 | E | 0 | - | |
| Other site of 14 | 80 | Y | 4.622 | H | 5 | - |
| 83 | A | 4.702 | C | 8 | ||
| 81 | I | 5.699 | C | 7 | - | |
| 82 | Q | 5.903 | C | 115 | - | |
| 84 | Q | 6.683 | C | 85 | - | |
| 85 | C | 7.281 | E | 0 | - | |
| 86 | A | 7.857 | E | 0 | ||
| 14 | V | 7.985 | E | 0 | ||
| 79 | Y | 8.445 | H | 3 | - | |
| 77 | D | 8.698 | H | 4 | - | |
| 13 | L | 9.007 | E | 1 | - | |
| 78 | G | 9.286 | H | 6 | - | |
| 12 | K | 9.441 | E | 18 | ||
| 105 | H | 9.953 | H | 19 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.573 | 111 | V | C | 20 | ||
| 4.622 | 80 | Y | H | 5 | ||
| 4.702 | 83 | A | C | 8 | ||
| TOP 3 |