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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1K5D
Chain: D
Site: 112
Chain: D
Site: 112
| PTM | Style | Surface | Display | SNO: D_112 |
| Flank: D_106~118 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 106 | R | 9.78 | H | 133 | - |
| 107 | D | 8.565 | H | 9 | - | |
| 108 | L | 5.323 | H | 0 | ||
| 109 | V | 5.864 | H | 46 | - | |
| 110 | R | 7.27 | H | 111 | - | |
| 111 | V | 4.911 | H | 50 | - | |
| Center | 112 | C | - | H | 21 | - |
| +6 | 113 | E | 6.269 | C | 150 | - |
| 114 | N | 8.061 | C | 111 | - | |
| 115 | I | 7.177 | C | 22 | ||
| 116 | P | 9.808 | C | 7 | - | |
| 117 | I | 9.845 | E | 4 | ||
| 118 | V | >10 | E | 0 | - | |
| Other site of 13 | 80 | Y | 4.342 | H | 0 | - |
| 83 | A | 4.751 | C | 13 | ||
| 81 | I | 5.499 | C | 89 | - | |
| 82 | Q | 6.106 | C | 165 | - | |
| 84 | Q | 6.713 | C | 54 | - | |
| 85 | C | 7.372 | E | 0 | - | |
| 86 | A | 7.859 | E | 0 | ||
| 14 | V | 7.898 | E | 0 | ||
| 79 | Y | 8.086 | H | 16 | - | |
| 77 | D | 8.325 | H | 59 | - | |
| 13 | L | 8.995 | E | 1 | - | |
| 78 | G | 9.418 | H | 45 | - | |
| 12 | K | 9.565 | E | 27 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.342 | 80 | Y | H | 0 | ||
| 4.751 | 83 | A | C | 13 | ||
| 4.911 | 111 | V | H | 50 | ||
| TOP 3 |