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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1K5D
Chain: J
Site: 112
Chain: J
Site: 112
| PTM | Style | Surface | Display | SNO: J_112 |
| Flank: J_106~118 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 106 | R | 9.656 | H | 103 | - |
| 107 | D | 8.481 | H | 8 | - | |
| 108 | L | 5.189 | H | 1 | ||
| 109 | V | 5.735 | H | 6 | - | |
| 110 | R | 7.206 | H | 86 | - | |
| 111 | V | 4.912 | H | 49 | - | |
| Center | 112 | C | - | H | 20 | - |
| +6 | 113 | E | 6.222 | C | 115 | - |
| 114 | N | 8.023 | C | 61 | - | |
| 115 | I | 7.141 | C | 23 | ||
| 116 | P | 9.742 | C | 8 | - | |
| 117 | I | 9.735 | E | 4 | ||
| 118 | V | >10 | E | 0 | - | |
| Other site of 14 | 80 | Y | 4.384 | H | 0 | - |
| 83 | A | 4.817 | C | 12 | ||
| 81 | I | 5.632 | C | 88 | - | |
| 82 | Q | 6.223 | C | 165 | - | |
| 84 | Q | 6.759 | C | 57 | - | |
| 85 | C | 7.33 | E | 0 | - | |
| 86 | A | 7.777 | E | 0 | ||
| 14 | V | 7.878 | E | 0 | ||
| 79 | Y | 8.12 | H | 18 | - | |
| 77 | D | 8.37 | H | 57 | - | |
| 13 | L | 8.997 | E | 1 | - | |
| 78 | G | 9.492 | H | 46 | - | |
| 12 | K | 9.611 | E | 27 | ||
| 105 | H | 9.879 | H | 4 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.384 | 80 | Y | H | 0 | ||
| 4.817 | 83 | A | C | 12 | ||
| 4.912 | 111 | V | H | 49 | ||
| TOP 3 |