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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1K5D
Chain: J
Site: 120
Chain: J
Site: 120
| PTM | Style | Surface | Display | SNO: J_120 |
| Flank: J_114~126 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 114 | N | >10 | C | 61 | - |
| 115 | I | >10 | C | 23 | - | |
| 116 | P | >10 | C | 8 | - | |
| 117 | I | 8.945 | E | 4 | - | |
| 118 | V | 5.668 | E | 0 | ||
| 119 | L | 4.732 | E | 0 | - | |
| Center | 120 | C | - | E | 0 | - |
| +6 | 121 | G | 6.237 | E | 0 | - |
| 122 | N | 7.193 | E | 6 | - | |
| 123 | K | >10 | C | 38 | - | |
| 124 | V | >10 | C | 34 | - | |
| 125 | D | >10 | C | 61 | - | |
| 126 | I | >10 | C | 59 | - | |
| Other site of 23 | 160 | P | 5.52 | H | 0 | |
| 147 | Y | 5.64 | E | 45 | - | |
| 89 | M | 5.763 | E | 1 | ||
| 87 | I | 5.77 | E | 2 | ||
| 88 | I | 6.385 | E | 0 | - | |
| 149 | I | 6.623 | C | 0 | ||
| 146 | Y | 6.843 | E | 28 | ||
| 148 | D | 7.131 | E | 27 | - | |
| 159 | K | 7.861 | H | 62 | - | |
| 157 | F | 7.993 | C | 18 | - | |
| 90 | F | 8.3 | E | 0 | ||
| 145 | Q | 8.592 | E | 37 | - | |
| 161 | F | 8.78 | H | 3 | ||
| 156 | N | 8.797 | C | 27 | - | |
| 23 | K | 9.077 | H | 13 | - | |
| 26 | F | 9.213 | H | 2 | ||
| 158 | E | 9.215 | C | 13 | - | |
| 15 | L | 9.218 | E | 2 | ||
| 86 | A | 9.251 | E | 0 | - | |
| 150 | S | 9.288 | C | 0 | - | |
| 151 | A | 9.941 | C | 3 | - | |
| 16 | V | 9.957 | E | 0 | - | |
| 22 | G | 9.995 | C | 9 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.732 | 119 | L | E | 0 | ||
| 5.52 | 160 | P | H | 0 | ||
| 5.64 | 147 | Y | E | 45 | ||
| TOP 3 |