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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1MD3
Chain: B
Site: 47
Chain: B
Site: 47
| PTM | Style | Surface | Display | SNO: B_47 |
| Flank: B_41~53 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 41 | G | 9.471 | C | 28 | - |
| 42 | S | 8.5 | H | 77 | - | |
| 43 | L | 5.267 | H | 35 | ||
| 44 | K | 4.321 | H | 88 | - | |
| 45 | A | 6.515 | H | 88 | - | |
| 46 | S | 5.304 | H | 70 | ||
| Center | 47 | C | - | C | 6 | - |
| +6 | 48 | L | 6.294 | C | 32 | - |
| 49 | Y | 7.129 | C | 41 | - | |
| 50 | G | 5.171 | C | 14 | - | |
| 51 | Q | 4.93 | C | 111 | - | |
| 52 | L | 5.396 | C | 20 | ||
| 53 | P | 7.289 | C | 5 | - | |
| Other site of 8 | 54 | K | 6.084 | E | 40 | |
| 63 | Y | 7.796 | E | 25 | ||
| 6 | V | 8.344 | E | 7 | ||
| 7 | Y | 8.976 | E | 20 | - | |
| 38 | W | 8.987 | H | 38 | ||
| 55 | F | 9.634 | E | 0 | - | |
| 62 | L | 9.867 | E | 0 | - | |
| 33 | V | 9.953 | C | 9 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.321 | 44 | K | H | 88 | ||
| 4.93 | 51 | Q | C | 111 | ||
| 5.171 | 50 | G | C | 14 | - | |
| TOP 3 |