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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1PDV
Chain: A
Site: 53
Chain: A
Site: 53
| PTM | Style | Surface | Display | SNO: A_53 |
| Flank: A_47~59 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 47 | S | >10 | C | 37 | - |
| 48 | R | >10 | C | 176 | - | |
| 49 | D | >10 | C | 108 | - | |
| 50 | V | >10 | C | 72 | - | |
| 51 | V | 6.757 | E | 90 | ||
| 52 | I | 5.053 | E | 32 | - | |
| Center | 53 | C | - | C | 90 | - |
| +6 | 54 | P | 6.422 | C | 15 | - |
| 55 | D | 8.546 | C | 88 | - | |
| 56 | A | >10 | E | 28 | - | |
| 57 | S | >10 | E | 9 | - | |
| 58 | L | >10 | H | 6 | - | |
| 59 | E | >10 | H | 132 | - | |
| Other site of 5 | 43 | P | 4.63 | C | 75 | |
| 42 | D | 6.939 | C | 129 | - | |
| 44 | V | 7.501 | E | 12 | - | |
| 41 | K | 8.836 | C | 141 | - | |
| 45 | Q | 9.674 | E | 84 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.63 | 43 | P | C | 75 | ||
| 5.053 | 52 | I | E | 32 | ||
| 6.422 | 54 | P | C | 15 | ||
| TOP 3 |