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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1PDW
Chain: A
Site: 53
Chain: A
Site: 53
| PTM | Style | Surface | Display | SNO: A_53 |
| Flank: A_47~59 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 47 | S | >10 | C | 34 | - |
| 48 | R | >10 | C | 71 | - | |
| 49 | D | >10 | C | 82 | - | |
| 50 | V | >10 | C | 7 | - | |
| 51 | V | 6.653 | E | 33 | ||
| 52 | I | 4.923 | E | 5 | - | |
| Center | 53 | C | - | E | 23 | - |
| +6 | 54 | P | 6.376 | C | 12 | - |
| 55 | D | 8.553 | C | 78 | - | |
| 56 | A | >10 | E | 27 | - | |
| 57 | S | >10 | E | 3 | - | |
| 58 | L | >10 | H | 4 | - | |
| 59 | E | >10 | H | 135 | - | |
| Other site of 5 | 43 | P | 4.412 | C | 71 | |
| 42 | D | 6.921 | C | 112 | - | |
| 44 | V | 7.191 | E | 13 | - | |
| 41 | K | 8.09 | C | 113 | - | |
| 45 | Q | 9.569 | E | 91 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.412 | 43 | P | C | 71 | ||
| 4.923 | 52 | I | E | 5 | ||
| 6.376 | 54 | P | C | 12 | ||
| TOP 3 |