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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1QBK
Chain: C
Site: 112
Chain: C
Site: 112
| PTM | Style | Surface | Display | SNO: C_112 |
| Flank: C_106~118 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 106 | R | >10 | H | 86 | - |
| 107 | D | >10 | H | 29 | - | |
| 108 | L | 6.706 | H | 0 | ||
| 109 | V | 7.161 | H | 49 | - | |
| 110 | R | 8.303 | C | 52 | - | |
| 111 | V | 5.461 | C | 35 | ||
| Center | 112 | C | - | C | 11 | - |
| +6 | 113 | E | 6.407 | C | 101 | - |
| 114 | N | 7.535 | C | 145 | - | |
| 115 | I | 5.976 | C | 21 | ||
| 116 | P | 9.038 | C | 25 | - | |
| 117 | I | 9.77 | E | 11 | ||
| 118 | V | >10 | E | 0 | - | |
| Other site of 13 | 83 | A | 3.034 | C | 10 | |
| 80 | Y | 4.359 | C | 6 | - | |
| 82 | Q | 4.743 | C | 61 | - | |
| 81 | I | 4.949 | C | 14 | - | |
| 84 | Q | 5.351 | C | 79 | - | |
| 85 | C | 6.519 | E | 0 | - | |
| 12 | K | 7.529 | E | 26 | ||
| 86 | A | 7.59 | E | 0 | ||
| 79 | Y | 7.614 | C | 11 | - | |
| 14 | V | 7.709 | E | 2 | ||
| 13 | L | 8.202 | E | 0 | - | |
| 78 | G | 9.154 | C | 1 | - | |
| 77 | D | 9.22 | C | 3 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.034 | 83 | A | C | 10 | ||
| 4.359 | 80 | Y | C | 6 | ||
| 4.743 | 82 | Q | C | 61 | ||
| TOP 3 |