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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1QJB
Chain: B
Site: 94
Chain: B
Site: 94
| PTM | Style | Surface | Display | SNO: B_94 |
| Flank: B_88~100 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 88 | T | 9.68 | H | 77 | - |
| 89 | E | 8.731 | H | 44 | - | |
| 90 | L | 5.374 | H | 1 | ||
| 91 | R | 4.965 | H | 70 | - | |
| 92 | D | 6.984 | H | 101 | - | |
| 93 | I | 5.469 | H | 20 | ||
| Center | 94 | C | - | H | 0 | - |
| +6 | 95 | N | 6.307 | H | 85 | - |
| 96 | D | 8.143 | H | 43 | - | |
| 97 | V | 7.661 | H | 2 | ||
| 98 | L | 8.076 | H | 9 | ||
| 99 | S | >10 | H | 75 | - | |
| 100 | L | >10 | H | 5 | - | |
| Other site of 18 | 125 | Y | 4.67 | H | 6 | - |
| 128 | Y | 4.714 | H | 3 | - | |
| 129 | L | 4.859 | H | 15 | ||
| 126 | Y | 6.318 | H | 46 | - | |
| 52 | V | 6.397 | H | 0 | ||
| 127 | R | 7.571 | H | 0 | - | |
| 124 | D | 8.088 | H | 8 | - | |
| 130 | A | 8.419 | H | 0 | - | |
| 56 | R | 8.6 | H | 6 | ||
| 131 | E | 8.883 | H | 29 | ||
| 132 | V | 9.09 | H | 6 | ||
| 55 | R | 9.093 | H | 47 | - | |
| 87 | E | 9.146 | H | 15 | - | |
| 53 | G | 9.155 | H | 21 | - | |
| 49 | K | 9.423 | H | 20 | - | |
| 48 | Y | 9.438 | H | 7 | - | |
| 122 | K | 9.598 | H | 31 | - | |
| 51 | V | 9.771 | H | 11 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.67 | 125 | Y | H | 6 | ||
| 4.714 | 128 | Y | H | 3 | ||
| 4.859 | 129 | L | H | 15 | ||
| TOP 3 |