dbSNO

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

PDB ID: 1YDI
Chain: A
Site: 85


	PTM	Style	Surface	Display
SNO: A_85
Flank: A_79~91
Other chain
Other site
All protein
Other Function
Chain		B-factor
Charge		Ligand

Main
Special Amino Acid Count
Other site annotation(Features)

	PDB site	Amino Acid	Distance(A)	Secondary Structure	Accessible surface area	Side Chian Angle
-6	79	I	>10	H	95	-
	80	K	>10	H	82	-
	81	V	7.405	H	0	-
	82	E	5.698	H	68	-
	83	N	7.359	H	91	-
	84	A	6.503	H	2	-
Center	85	C	-	H	7	-
+6	86	T	5.139	H	80	-
	87	K	7.435	H	48	-
	88	L	6.353	H	0
	89	V	6.456	H	26
	90	Q	9.647	H	84	-
	91	A	>10	H	0	-
Other site of 12	48	Q	3.698	H	89	-
	47	V	5.42	H	0
	51	V	5.598	H	4
	44	V	7.077	H	3	-
	49	A	7.223	H	53	-
	45	A	7.418	H	42	-
	52	S	7.466	H	68
	50	A	7.693	H	3	-
	46	A	8.334	H	51	-
	111	G	8.362	H	0	-
	115	I	8.419	H	4
	112	S	9.553	H	1	-

Show

Neighbor Amino Acid Top 3
Distance(A)	PDB site	Amino Acid	Secondary Structure	Accessible surface area	Side Chian Angle	Single
3.698	48	Q	H	89
5.139	86	T	H	80
5.42	47	V	H	0

TOP 3

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Modified residue	173	88		N6-acetyllysine
Modified residue	288	203	Outside Of PDB File	Phosphoserine
Modified residue	290	205	Outside Of PDB File	Phosphoserine
Modified residue	346	261	Outside Of PDB File	Phosphoserine
Modified residue	434	349	Outside Of PDB File	Phosphoserine
Modified residue	496	411	Outside Of PDB File	N6-acetyllysine
Modified residue	721	636	Outside Of PDB File	Phosphoserine
Modified residue	822	737	Outside Of PDB File	Phosphotyrosine
Modified residue	1133	1048	Outside Of PDB File	Phosphotyrosine; by SRC-type Tyr-kinases

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