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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 1YVD
Chain: A
Site: 9
Chain: A
Site: 9
| PTM | Style | Surface | Display | SNO: A_9 |
| Flank: A_3~15 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 3 | L | >10 | C | 98 | - |
| 4 | R | >10 | E | 82 | - | |
| 5 | E | >10 | E | 127 | - | |
| 6 | L | >10 | E | 5 | - | |
| 7 | K | 7.798 | E | 38 | ||
| 8 | V | 5.424 | E | 0 | - | |
| Center | 9 | C | - | E | 0 | - |
| +6 | 10 | L | 5.117 | E | 0 | - |
| 11 | L | 6.147 | E | 3 | ||
| 12 | G | 9.909 | C | 0 | - | |
| 13 | D | >10 | C | 33 | - | |
| 14 | T | >10 | C | 61 | - | |
| 15 | G | >10 | C | 49 | - | |
| Other site of 23 | 75 | Y | 3.783 | H | 14 | - |
| 81 | A | 4.167 | E | 0 | ||
| 74 | Y | 5.341 | H | 15 | - | |
| 78 | S | 5.873 | C | 7 | ||
| 80 | A | 6.408 | E | 0 | - | |
| 82 | I | 6.504 | E | 0 | - | |
| 59 | W | 6.766 | E | 78 | - | |
| 76 | R | 7.382 | C | 54 | - | |
| 71 | A | 7.599 | H | 12 | - | |
| 61 | T | 8.052 | E | 6 | ||
| 83 | I | 8.064 | E | 0 | - | |
| 72 | P | 8.161 | H | 62 | - | |
| 60 | D | 8.261 | E | 1 | - | |
| 79 | A | 8.297 | C | 27 | - | |
| 58 | I | 8.455 | E | 0 | - | |
| 107 | G | 8.569 | C | 19 | - | |
| 103 | L | 8.574 | H | 7 | ||
| 77 | G | 8.584 | C | 68 | - | |
| 73 | M | 8.717 | H | 107 | - | |
| 111 | I | 9.008 | C | 28 | ||
| 113 | V | 9.027 | E | 34 | - | |
| 112 | V | 9.734 | E | 19 | - | |
| 108 | P | 9.792 | C | 34 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.783 | 75 | Y | H | 14 | ||
| 4.167 | 81 | A | E | 0 | ||
| 5.117 | 10 | L | E | 0 | ||
| TOP 3 |