dbSNO

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

PDB ID: 2B4S
Chain: D
Site: 1056


	PTM	Style	Surface	Display
SNO: D_1056
Flank: D_1050~1062
Other chain
Other site
All protein
Other Function
Chain		B-factor
Charge		Ligand

	PDB site	Amino Acid	Distance(A)	Secondary Structure	Accessible surface area	Side Chian Angle
-6	1050	V	>10	H	21	-
	1051	M	>10	H	5	-
	1052	K	>10	C	54	-
	1053	G	>10	C	45	-
	1054	F	7.765	C	23	-
	1055	T	6.214	C	121	-
Center	1056	C	-	C	20	-
+6	1057	H	4.535	C	54	-
	1058	H	4.2	C	1	-
	1059	V	5.084	E	7
	1060	V	8.589	C	6	-
	1061	R	9.764	C	136	-
	1062	L	>10	E	5	-
Other site of 16	1119	G	4.312	H	0	-
	1122	Y	5.276	H	4
	1276	F	5.325	C	10	-
	1118	D	6.182	H	0
	1275	S	6.368	C	4	-
	1123	L	7.467	H	3	-
	1120	M	7.553	H	2	-
	1121	A	7.751	H	3	-
	1274	V	8.002	H	15	-
	1147	K	8.069	E	22
	1115	E	8.413	H	12	-
	1148	I	8.578	E	1
	1277	F	8.602	C	31	-
	1116	I	8.844	H	0	-
	1117	A	9.3	H	0	-
	1279	S	9.601	C	38

Show

Neighbor Amino Acid Top 3
Distance(A)	PDB site	Amino Acid	Secondary Structure	Accessible surface area	Side Chian Angle	Single
4.2	1058	H	C	1
4.312	1119	G	H	0	-
4.535	1057	H	C	54

TOP 3

Amino acid modifications

Amino acid modifications image of Seq Distance (Amino Acid) of Cysteine:

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Modified residue	400	-683	Outside Of PDB File	Phosphoserine
Modified residue	401	-682	Outside Of PDB File	Phosphotyrosine
Modified residue	407	-676	Outside Of PDB File	Phosphoserine
Modified residue	999	-84	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Modified residue	1185	102		Phosphotyrosine; by autocatalysis
Modified residue	1189	106		Phosphotyrosine; by autocatalysis
Modified residue	1190	107		Phosphotyrosine; by autocatalysis
Modified residue	1355	272	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Modified residue	1361	278	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Glycosylation	43	-1040	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	52	-1031	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	138	-945	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	242	-841	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	282	-801	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	364	-719	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	424	-659	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	445	-638	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	541	-542	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	769	-314	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	920	-163	Outside Of PDB File	N-linked (GlcNAc...)
Disulfide bond	35<-->53	-1048<-->-1030	Outside Of PDB File
Disulfide bond	153<-->182	-930<-->-901	Outside Of PDB File
Disulfide bond	186<-->209	-897<-->-874	Outside Of PDB File
Disulfide bond	196<-->215	-887<-->-868	Outside Of PDB File
Disulfide bond	219<-->228	-864<-->-855	Outside Of PDB File
Disulfide bond	223<-->234	-860<-->-849	Outside Of PDB File
Disulfide bond	235<-->243	-848<-->-840	Outside Of PDB File
Disulfide bond	239<-->252	-844<-->-831	Outside Of PDB File
Disulfide bond	255<-->264	-828<-->-819	Outside Of PDB File
Disulfide bond	268<-->280	-815<-->-803	Outside Of PDB File
Disulfide bond	286<-->311	-797<-->-772	Outside Of PDB File
Disulfide bond	293<-->301	-790<-->-782	Outside Of PDB File
Disulfide bond	315<-->328	-768<-->-755	Outside Of PDB File
Disulfide bond	331<-->335	-752<-->-748	Outside Of PDB File
Disulfide bond	339<-->360	-744<-->-723	Outside Of PDB File
Disulfide bond	462<-->495	-621<-->-588	Outside Of PDB File
Disulfide bond	551	-532	Outside Of PDB File
Disulfide bond	674<-->899	-409<-->-184	Outside Of PDB File
Disulfide bond	825<-->834	-258<-->-249	Outside Of PDB File

Binding site

Binding site image of Seq Distance (Amino Acid) of Cysteine:

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Binding site	1033	-50		ATP
Binding site	1057	-26		ATP
Binding site	1177	94		ATP

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