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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2PDH
Chain: A
Site: 298
Chain: A
Site: 298
| PTM | Style | Surface | Display | SNO: A_298 |
| Flank: A_292~304 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 292 | N | >10 | C | 49 | - |
| 293 | R | >10 | C | 203 | - | |
| 294 | N | >10 | C | 121 | - | |
| 295 | W | >10 | C | 50 | - | |
| 296 | R | 7.087 | C | 60 | - | |
| 297 | V | 4.675 | C | 2 | ||
| Center | 298 | C | - | C | 9 | - |
| +6 | 299 | A | 6.413 | C | 36 | - |
| 300 | P | 8.331 | C | 59 | ||
| 301 | L | >10 | H | 140 | - | |
| 302 | S | >10 | H | 52 | - | |
| 303 | C | >10 | H | 13 | - | |
| 304 | T | >10 | C | 28 | - | |
| Other site of 11 | 185 | E | 6.911 | E | 1 | |
| 210 | S | 7.201 | C | 17 | ||
| 217 | R | 7.677 | C | 14 | - | |
| 214 | S | 7.983 | C | 8 | ||
| 209 | Y | 8.093 | E | 19 | ||
| 184 | I | 8.88 | E | 4 | - | |
| 213 | G | 9.182 | C | 5 | - | |
| 160 | N | 9.238 | C | 2 | ||
| 219 | W | 9.792 | C | 123 | ||
| 218 | P | 9.842 | C | 100 | ||
| 20 | W | 9.9 | C | 69 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.675 | 297 | V | C | 2 | ||
| 6.413 | 299 | A | C | 36 | ||
| 6.911 | 185 | E | E | 1 | ||
| TOP 3 |