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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2PDM
Chain: A
Site: 303
Chain: A
Site: 303
| PTM | Style | Surface | Display | SNO: A_303 |
| Flank: A_297~309 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 297 | V | >10 | C | 3 | - |
| 298 | C | >10 | C | 16 | - | |
| 299 | A | 7.955 | C | 27 | - | |
| 300 | L | 5.343 | C | 59 | ||
| 301 | L | 6.31 | H | 134 | - | |
| 302 | R | 4.801 | H | 120 | - | |
| Center | 303 | C | - | H | 11 | - |
| +6 | 304 | T | 6.416 | C | 50 | - |
| 305 | S | 8.062 | C | 106 | - | |
| 306 | H | 7.051 | C | 11 | ||
| 307 | K | >10 | C | 129 | - | |
| 308 | D | 9.888 | C | 28 | - | |
| 309 | Y | 7.538 | C | 25 | ||
| Other site of 12 | 130 | V | 5.566 | E | 12 | |
| 122 | F | 7.352 | C | 65 | ||
| 113 | T | 7.579 | C | 5 | ||
| 129 | N | 7.722 | C | 69 | - | |
| 115 | F | 8.316 | E | 3 | ||
| 131 | V | 8.471 | C | 37 | - | |
| 132 | P | 8.652 | E | 72 | - | |
| 80 | C | 9.164 | H | 1 | ||
| 114 | G | 9.187 | C | 1 | - | |
| 111 | W | 9.202 | C | 40 | ||
| 123 | P | 9.415 | C | 5 | ||
| 124 | L | 9.441 | E | 77 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.801 | 302 | R | H | 120 | ||
| 5.343 | 300 | L | C | 59 | ||
| 5.566 | 130 | V | E | 12 | ||
| TOP 3 |