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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2VR6
Chain: F
Site: 6
Chain: F
Site: 6
| PTM | Style | Surface | Display | SNO: F_6 |
| Flank: F_0~12 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 0 | >10 | - | |||
| 1 | A | >10 | C | 93 | - | |
| 2 | T | >10 | E | 65 | - | |
| 3 | K | >10 | E | 85 | - | |
| 4 | A | 8.944 | E | 2 | ||
| 5 | V | 6.263 | E | 3 | - | |
| Center | 6 | C | - | E | 1 | - |
| +6 | 7 | V | 4.532 | E | 23 | - |
| 8 | L | 5.103 | E | 0 | ||
| 9 | K | 8.483 | E | 107 | - | |
| 10 | G | >10 | C | 34 | - | |
| 11 | D | >10 | C | 177 | - | |
| 12 | G | >10 | C | 46 | - | |
| Other site of 20 | 147 | G | 3.729 | E | 10 | - |
| 149 | I | 4.574 | C | 0 | - | |
| 148 | V | 4.683 | E | 20 | - | |
| 117 | L | 4.727 | E | 0 | ||
| 146 | C | 5.888 | E | 7 | - | |
| 116 | T | 6.037 | E | 4 | - | |
| 18 | I | 6.298 | E | 0 | ||
| 17 | I | 6.982 | E | 68 | - | |
| 118 | V | 7.332 | E | 0 | - | |
| 150 | G | 7.487 | E | 0 | - | |
| 16 | G | 8.219 | E | 10 | - | |
| 115 | R | 8.262 | C | 40 | - | |
| 19 | N | 8.361 | E | 46 | - | |
| 47 | V | 8.807 | E | 0 | - | |
| 145 | A | 8.967 | E | 0 | ||
| 114 | G | 9.272 | C | 0 | - | |
| 51 | G | 9.297 | C | 2 | - | |
| 113 | I | 9.414 | C | 20 | - | |
| 119 | V | 9.532 | E | 0 | ||
| 20 | F | 9.806 | E | 1 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.729 | 147 | G | E | 10 | - | |
| 4.532 | 7 | V | E | 23 | ||
| 4.574 | 149 | I | C | 0 | ||
| TOP 3 |