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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2VYI
Chain: B
Site: 129
Chain: B
Site: 129
| PTM | Style | Surface | Display | SNO: B_129 |
| Flank: B_123~135 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 123 | A | >10 | C | 71 | - |
| 124 | N | >10 | C | 43 | - | |
| 125 | A | 7.308 | H | 8 | ||
| 126 | V | 5.793 | H | 43 | - | |
| 127 | Y | 7.733 | H | 0 | - | |
| 128 | F | 6.484 | H | 4 | - | |
| Center | 129 | C | - | H | 0 | - |
| +6 | 130 | N | 5.231 | H | 21 | - |
| 131 | R | 7.876 | H | 45 | - | |
| 132 | A | 6.767 | H | 0 | ||
| 133 | A | 7.026 | H | 16 | ||
| 134 | A | >10 | H | 0 | - | |
| 135 | Y | >10 | H | 49 | - | |
| Other site of 15 | 161 | A | 3.628 | H | 0 | - |
| 160 | K | 4.653 | H | 62 | ||
| 164 | R | 6.112 | H | 63 | ||
| 148 | C | 6.332 | H | 0 | ||
| 151 | A | 6.772 | H | 0 | ||
| 158 | Y | 7.153 | C | 42 | ||
| 162 | Y | 7.303 | H | 19 | - | |
| 163 | G | 7.543 | H | 4 | - | |
| 159 | S | 7.61 | H | 28 | - | |
| 165 | M | 8.156 | H | 2 | - | |
| 147 | D | 8.272 | H | 9 | - | |
| 152 | I | 8.305 | H | 22 | - | |
| 144 | A | 9.4 | H | 0 | - | |
| 149 | E | 9.685 | H | 123 | - | |
| 150 | R | 9.847 | H | 115 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.628 | 161 | A | H | 0 | ||
| 4.653 | 160 | K | H | 62 | ||
| 5.231 | 130 | N | H | 21 | ||
| TOP 3 |