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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2Y3I
Chain: D
Site: 107
Chain: D
Site: 107
| PTM | Style | Surface | Display | SNO: D_107 |
| Flank: D_101~113 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 101 | P | 9.522 | H | 111 | - |
| 102 | E | 8.654 | H | 166 | - | |
| 103 | V | 5.254 | H | 9 | - | |
| 104 | E | 5.129 | H | 46 | - | |
| 105 | K | 6.78 | H | 168 | - | |
| 106 | A | 4.91 | H | 47 | ||
| Center | 107 | C | - | H | 0 | - |
| +6 | 108 | A | 6.292 | C | 56 | - |
| 109 | N | 8.29 | C | 111 | - | |
| 110 | P | 8.058 | C | 20 | ||
| 111 | A | >10 | C | 79 | - | |
| 112 | A | >10 | C | 95 | - | |
| 113 | G | >10 | C | 34 | - | |
| Other site of 24 | 156 | L | 5.069 | H | 1 | |
| 58 | V | 6.066 | E | 0 | ||
| 116 | I | 6.484 | E | 8 | ||
| 118 | L | 6.938 | C | 0 | ||
| 98 | C | 7.632 | C | 1 | - | |
| 157 | G | 7.855 | C | 2 | - | |
| 117 | L | 8.025 | E | 0 | - | |
| 155 | K | 8.12 | H | 106 | - | |
| 95 | L | 8.225 | C | 24 | ||
| 99 | V | 8.341 | C | 33 | - | |
| 19 | V | 8.524 | E | 0 | ||
| 153 | L | 8.547 | H | 0 | - | |
| 100 | G | 8.553 | C | 9 | - | |
| 59 | L | 8.587 | E | 0 | - | |
| 57 | V | 8.813 | E | 0 | - | |
| 115 | V | 9.039 | E | 7 | - | |
| 56 | S | 9.043 | E | 0 | ||
| 17 | R | 9.455 | E | 35 | ||
| 97 | D | 9.589 | C | 66 | - | |
| 94 | F | 9.729 | E | 42 | - | |
| 60 | M | 9.73 | E | 0 | ||
| 93 | L | 9.827 | E | 100 | ||
| 152 | S | 9.924 | H | 24 | - | |
| 18 | V | 9.926 | E | 0 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.91 | 106 | A | H | 47 | ||
| 5.069 | 156 | L | H | 1 | ||
| 5.129 | 104 | E | H | 46 | ||
| TOP 3 |