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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2YBE
Chain: A
Site: 107
Chain: A
Site: 107
| PTM | Style | Surface | Display | SNO: A_107 |
| Flank: A_101~113 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 101 | P | 9.935 | H | 99 | - |
| 102 | E | 8.364 | H | 133 | - | |
| 103 | V | 5.099 | H | 5 | - | |
| 104 | E | 5.557 | H | 49 | - | |
| 105 | K | 7.025 | H | 175 | - | |
| 106 | A | 4.942 | H | 40 | ||
| Center | 107 | C | - | H | 0 | - |
| +6 | 108 | A | 6.346 | H | 57 | - |
| 109 | N | 8.419 | C | 120 | - | |
| 110 | P | 7.962 | C | 18 | ||
| 111 | A | >10 | C | 76 | - | |
| 112 | A | >10 | C | 95 | - | |
| 113 | G | >10 | C | 24 | - | |
| Other site of 25 | 156 | L | 4.994 | C | 1 | |
| 58 | V | 5.842 | E | 0 | ||
| 116 | I | 6.312 | E | 6 | ||
| 118 | L | 7.336 | C | 0 | ||
| 157 | G | 7.63 | C | 1 | - | |
| 98 | C | 7.833 | C | 0 | - | |
| 117 | L | 7.857 | E | 0 | - | |
| 95 | L | 7.89 | C | 22 | ||
| 19 | V | 8.24 | E | 0 | ||
| 155 | K | 8.296 | C | 119 | - | |
| 59 | L | 8.536 | E | 0 | - | |
| 99 | V | 8.546 | C | 10 | - | |
| 56 | S | 8.582 | E | 0 | ||
| 153 | L | 8.591 | H | 0 | - | |
| 57 | V | 8.608 | E | 0 | - | |
| 115 | V | 8.966 | E | 6 | - | |
| 17 | R | 9.091 | E | 24 | ||
| 93 | L | 9.193 | E | 88 | ||
| 94 | F | 9.572 | E | 31 | - | |
| 97 | D | 9.608 | C | 63 | - | |
| 114 | S | 9.635 | E | 37 | ||
| 60 | M | 9.691 | E | 0 | ||
| 18 | V | 9.817 | E | 0 | - | |
| 100 | G | 9.868 | C | 19 | - | |
| 152 | S | 9.943 | H | 8 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.942 | 106 | A | H | 40 | ||
| 4.994 | 156 | L | C | 1 | ||
| 5.099 | 103 | V | H | 5 | ||
| TOP 3 |