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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 2YBE
Chain: A
Site: 98
Chain: A
Site: 98
| PTM | Style | Surface | Display | SNO: A_98 |
| Flank: A_92~104 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 92 | V | >10 | C | 2 | - |
| 93 | L | >10 | E | 88 | - | |
| 94 | F | >10 | E | 31 | - | |
| 95 | L | 9.536 | C | 22 | - | |
| 96 | K | 8.617 | C | 186 | - | |
| 97 | D | 5.288 | C | 63 | ||
| Center | 98 | C | - | C | 0 | - |
| +6 | 99 | V | 4.714 | C | 10 | |
| 100 | G | 8.26 | C | 19 | - | |
| 101 | P | >10 | H | 99 | - | |
| 102 | E | >10 | H | 133 | - | |
| 103 | V | 8.837 | H | 5 | ||
| 104 | E | >10 | H | 49 | - | |
| Other site of 19 | 121 | L | 4.086 | H | 0 | - |
| 119 | E | 5.806 | C | 6 | - | |
| 120 | N | 5.924 | C | 0 | - | |
| 124 | H | 6.168 | C | 40 | ||
| 118 | L | 6.647 | C | 0 | ||
| 123 | F | 6.751 | H | 12 | - | |
| 122 | R | 7.009 | H | 8 | - | |
| 153 | L | 7.66 | H | 0 | ||
| 127 | E | 7.81 | H | 0 | ||
| 60 | M | 7.854 | E | 0 | ||
| 149 | F | 7.929 | H | 0 | ||
| 61 | S | 8.541 | C | 0 | - | |
| 62 | H | 8.789 | C | 6 | - | |
| 126 | E | 8.87 | H | 30 | - | |
| 152 | S | 8.879 | H | 8 | ||
| 174 | S | 8.992 | H | 0 | ||
| 125 | V | 9.575 | H | 30 | - | |
| 150 | R | 9.669 | H | 75 | - | |
| 70 | P | 9.714 | C | 85 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.086 | 121 | L | H | 0 | ||
| 4.714 | 99 | V | C | 10 | ||
| 5.288 | 97 | D | C | 63 | ||
| TOP 3 |