dbSNO

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

PDB ID: 2Z8C
Chain: A
Site: 1234


	PTM	Style	Surface	Display
SNO: A_1234
Flank: A_1228~1240
Other chain
Other site
All protein
Other Function
Chain		B-factor
Charge		Ligand

	PDB site	Amino Acid	Distance(A)	Secondary Structure	Accessible surface area	Side Chian Angle
-6	1228	L	>10	C	10	-
	1229	D	9.452	C	128	-
	1230	Q	5.843	C	60
	1231	P	5.226	C	21
	1232	D	6.678	C	147	-
	1233	N	6.5	C	170	-
Center	1234	C	-	C	23	-
+6	1235	P	4.387	C	33	-
	1236	E	5.961	H	142	-
	1237	R	7.748	H	90	-
	1238	V	5.643	H	4
	1239	T	4.872	H	25
	1240	D	8.519	H	50	-
Other site of 9	1203	T	5.652	H	20
	1200	W	7.206	H	20	-
	1204	S	7.715	H	14	-
	1199	L	8.215	H	4	-
	1242	M	8.578	H	0
	1202	I	8.922	H	3	-
	1241	L	9.437	H	3	-
	1106	L	9.748	H	81
	1201	E	9.889	H	2	-

Show

Neighbor Amino Acid Top 3
Distance(A)	PDB site	Amino Acid	Secondary Structure	Accessible surface area	Side Chian Angle	Single
4.387	1235	P	C	33
4.872	1239	T	H	25
5.226	1231	P	C	21

TOP 3

Amino acid modifications

Amino acid modifications image of Seq Distance (Amino Acid) of Cysteine:

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Modified residue	400	-861	Outside Of PDB File	Phosphoserine
Modified residue	401	-860	Outside Of PDB File	Phosphotyrosine
Modified residue	407	-854	Outside Of PDB File	Phosphoserine
Modified residue	999	-262	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Modified residue	1185	-76		Phosphotyrosine; by autocatalysis
Modified residue	1189	-72		Phosphotyrosine; by autocatalysis
Modified residue	1190	-71		Phosphotyrosine; by autocatalysis
Modified residue	1355	94	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Modified residue	1361	100	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Glycosylation	43	-1218	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	52	-1209	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	138	-1123	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	242	-1019	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	282	-979	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	364	-897	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	424	-837	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	445	-816	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	541	-720	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	769	-492	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	920	-341	Outside Of PDB File	N-linked (GlcNAc...)
Disulfide bond	35<-->53	-1226<-->-1208	Outside Of PDB File
Disulfide bond	153<-->182	-1108<-->-1079	Outside Of PDB File
Disulfide bond	186<-->209	-1075<-->-1052	Outside Of PDB File
Disulfide bond	196<-->215	-1065<-->-1046	Outside Of PDB File
Disulfide bond	219<-->228	-1042<-->-1033	Outside Of PDB File
Disulfide bond	223<-->234	-1038<-->-1027	Outside Of PDB File
Disulfide bond	235<-->243	-1026<-->-1018	Outside Of PDB File
Disulfide bond	239<-->252	-1022<-->-1009	Outside Of PDB File
Disulfide bond	255<-->264	-1006<-->-997	Outside Of PDB File
Disulfide bond	268<-->280	-993<-->-981	Outside Of PDB File
Disulfide bond	286<-->311	-975<-->-950	Outside Of PDB File
Disulfide bond	293<-->301	-968<-->-960	Outside Of PDB File
Disulfide bond	315<-->328	-946<-->-933	Outside Of PDB File
Disulfide bond	331<-->335	-930<-->-926	Outside Of PDB File
Disulfide bond	339<-->360	-922<-->-901	Outside Of PDB File
Disulfide bond	462<-->495	-799<-->-766	Outside Of PDB File
Disulfide bond	551	-710	Outside Of PDB File
Disulfide bond	674<-->899	-587<-->-362	Outside Of PDB File
Disulfide bond	825<-->834	-436<-->-427	Outside Of PDB File

Binding site

Binding site image of Seq Distance (Amino Acid) of Cysteine:

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Binding site	1033	-228	Outside Of PDB File	ATP
Binding site	1057	-204		ATP
Binding site	1177	-84		ATP

Menu:

Latest news: