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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3DQW
Chain: D
Site: 498
Chain: D
Site: 498
| PTM | Style | Surface | Display | SNO: D_498 |
| Flank: D_492~504 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 492 | H | 9.369 | H | 19 | - |
| 493 | D | 8.85 | H | 82 | - | |
| 494 | L | 5.593 | H | 1 | ||
| 495 | M | 4.757 | H | 0 | - | |
| 496 | C | 6.647 | H | 42 | - | |
| 497 | Q | 5.354 | H | 38 | - | |
| Center | 498 | C | - | H | 0 | - |
| +6 | 499 | W | 6.296 | C | 1 | - |
| 500 | R | 8.607 | C | 104 | ||
| 501 | K | >10 | C | 156 | - | |
| 502 | D | >10 | C | 67 | - | |
| 503 | P | >10 | H | 26 | - | |
| 504 | E | >10 | H | 138 | - | |
| Other site of 19 | 449 | G | 4.132 | H | 0 | - |
| 445 | V | 5.243 | H | 0 | ||
| 446 | W | 5.658 | H | 2 | - | |
| 448 | F | 5.663 | H | 0 | ||
| 507 | P | 6.304 | C | 16 | ||
| 506 | R | 6.702 | C | 5 | - | |
| 512 | L | 6.978 | H | 0 | ||
| 447 | S | 7.627 | H | 7 | - | |
| 450 | I | 7.892 | H | 0 | - | |
| 452 | L | 7.962 | H | 4 | ||
| 509 | F | 8.077 | H | 0 | ||
| 508 | T | 8.123 | C | 50 | - | |
| 444 | D | 8.818 | H | 1 | - | |
| 451 | L | 8.906 | H | 0 | - | |
| 442 | K | 8.957 | H | 24 | - | |
| 511 | Y | 9.461 | H | 47 | ||
| 443 | S | 9.495 | H | 3 | - | |
| 491 | L | 9.55 | H | 3 | - | |
| 371 | A | 9.561 | H | 0 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.132 | 449 | G | H | 0 | - | |
| 4.757 | 495 | M | H | 0 | ||
| 5.243 | 445 | V | H | 0 | ||
| TOP 3 |