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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3GQF
Chain: D
Site: 6
Chain: D
Site: 6
| PTM | Style | Surface | Display | SNO: D_6 |
| Flank: D_0~12 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 0 | >10 | - | |||
| 1 | A | >10 | C | 103 | - | |
| 2 | T | >10 | E | 45 | - | |
| 3 | K | >10 | E | 73 | - | |
| 4 | A | 8.879 | E | 1 | ||
| 5 | V | 6.227 | E | 2 | - | |
| Center | 6 | C | - | E | 1 | - |
| +6 | 7 | V | 4.489 | E | 25 | - |
| 8 | L | 5.101 | E | 0 | ||
| 9 | K | 8.414 | E | 123 | - | |
| 10 | G | >10 | C | 36 | - | |
| 11 | D | >10 | C | 181 | - | |
| 12 | G | >10 | C | 52 | - | |
| Other site of 16 | 147 | G | 3.804 | E | 7 | - |
| 149 | I | 4.505 | C | 0 | - | |
| 117 | L | 4.682 | E | 0 | ||
| 148 | V | 4.689 | E | 17 | - | |
| 146 | C | 5.896 | E | 9 | - | |
| 116 | T | 6 | E | 0 | - | |
| 17 | I | 7.056 | E | 68 | - | |
| 118 | V | 7.117 | E | 0 | - | |
| 150 | G | 7.371 | E | 0 | - | |
| 115 | R | 8.149 | C | 36 | - | |
| 16 | G | 8.33 | E | 10 | - | |
| 47 | V | 8.8 | E | 0 | - | |
| 145 | A | 8.843 | E | 0 | - | |
| 114 | G | 9.12 | C | 0 | - | |
| 51 | G | 9.257 | C | 2 | - | |
| 113 | I | 9.307 | C | 15 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.804 | 147 | G | E | 7 | - | |
| 4.489 | 7 | V | E | 25 | ||
| 4.505 | 149 | I | C | 0 | ||
| TOP 3 |