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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3J11
Chain: D
Site: 5
Chain: D
Site: 5
| PTM | Style | Surface | Display | SNO: D_5 |
| Flank: D_-1~11 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | - | |||||
| 0 | >10 | - | ||||
| 1 | A | >10 | C | 53 | - | |
| 2 | V | >10 | E | 36 | - | |
| 3 | V | 7.13 | E | 79 | - | |
| 4 | K | 5.033 | E | 112 | - | |
| Center | 5 | C | - | C | 30 | - |
| +6 | 6 | K | 6.041 | C | 164 | - |
| 7 | P | 6.826 | C | 89 | - | |
| 8 | T | 8.143 | C | 90 | ||
| 9 | S | 9.013 | C | 59 | - | |
| 10 | P | >10 | C | 98 | - | |
| 11 | G | 8.968 | C | 37 | - | |
| Other site of 9 | 15 | V | 4.519 | C | 12 | |
| 12 | R | 5.301 | C | 115 | ||
| 16 | V | 5.43 | E | 13 | - | |
| 17 | K | 6.829 | E | 96 | ||
| 14 | H | 6.952 | C | 118 | - | |
| 13 | R | 6.974 | C | 139 | - | |
| 205 | G | 8.374 | C | 23 | - | |
| 204 | L | 9.345 | C | 82 | - | |
| 206 | K | 9.922 | C | 86 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.519 | 15 | V | C | 12 | ||
| 5.033 | 4 | K | E | 112 | ||
| 5.301 | 12 | R | C | 115 | ||
| TOP 3 |