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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3J39
Chain: q
Site: 27
Chain: q
Site: 27
| PTM | Style | Surface | Display | SNO: q_27 |
| Flank: q_21~33 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 21 | L | 7.395 | H | 7 | |
| 22 | D | >10 | H | 43 | - | |
| 23 | D | >10 | H | 64 | - | |
| 24 | Y | 8.514 | C | 36 | - | |
| 25 | P | 8.35 | C | 50 | - | |
| 26 | K | 6.271 | C | 10 | - | |
| Center | 27 | C | - | C | 1 | - |
| +6 | 28 | F | 4.8 | E | 0 | - |
| 29 | I | 5.506 | E | 2 | - | |
| 30 | V | 8.76 | E | 15 | - | |
| 31 | G | >10 | E | 0 | - | |
| 32 | A | >10 | C | 28 | - | |
| 33 | D | >10 | C | 128 | - | |
| Other site of 20 | 88 | F | 4.968 | E | 0 | |
| 90 | F | 5.905 | E | 2 | ||
| 89 | V | 6.164 | E | 2 | - | |
| 193 | F | 6.175 | E | 10 | ||
| 192 | V | 6.986 | E | 1 | - | |
| 78 | L | 7.087 | C | 1 | ||
| 87 | G | 8.074 | C | 0 | - | |
| 191 | Q | 8.481 | E | 45 | - | |
| 81 | H | 8.539 | H | 25 | - | |
| 194 | D | 8.605 | C | 20 | - | |
| 54 | L | 8.644 | E | 24 | - | |
| 86 | V | 8.939 | C | 13 | ||
| 82 | I | 8.959 | C | 12 | - | |
| 20 | L | 8.974 | H | 12 | - | |
| 75 | L | 9.101 | H | 7 | ||
| 53 | V | 9.226 | E | 3 | - | |
| 55 | M | 9.359 | C | 49 | - | |
| 79 | L | 9.7 | H | 42 | - | |
| 60 | M | 9.715 | C | 0 | ||
| 63 | K | 9.815 | H | 1 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.8 | 28 | F | E | 0 | ||
| 4.968 | 88 | F | E | 0 | ||
| 5.506 | 29 | I | E | 2 | ||
| TOP 3 |