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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3J54
Chain: W
Site: 52
Chain: W
Site: 52
| PTM | Style | Surface | Display | SNO: W_52 |
| Flank: W_46~58 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 46 | A | 9.671 | C | 18 | - |
| 47 | G | >10 | H | 40 | - | |
| 48 | A | >10 | H | 47 | - | |
| 49 | N | 8.089 | H | 9 | - | |
| 50 | V | 5.531 | C | 41 | - | |
| 51 | G | 4.698 | C | 43 | - | |
| Center | 52 | C | - | C | 47 | - |
| +6 | 53 | G | 6.573 | C | 52 | - |
| 54 | R | 7.961 | C | 245 | - | |
| 55 | D | 7.195 | C | 89 | - | |
| 56 | H | 3.798 | C | 40 | - | |
| 57 | T | 5.657 | C | 34 | - | |
| 58 | L | 5.62 | C | 8 | ||
| Other site of 11 | 45 | H | 7.07 | E | 35 | |
| 40 | R | 7.544 | C | 188 | - | |
| 44 | F | 7.699 | C | 21 | ||
| 59 | F | 8.469 | C | 124 | - | |
| 35 | I | 8.496 | C | 25 | - | |
| 43 | K | 9.343 | C | 91 | - | |
| 36 | I | 9.37 | C | 32 | ||
| 41 | G | 9.578 | C | 21 | - | |
| 33 | G | 9.64 | C | 8 | - | |
| 34 | S | 9.694 | C | 6 | - | |
| 38 | R | 9.711 | C | 195 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.798 | 56 | H | C | 40 | ||
| 4.698 | 51 | G | C | 43 | - | |
| 5.531 | 50 | V | C | 41 | ||
| TOP 3 |