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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3J5K
Chain: W
Site: 52
Chain: W
Site: 52
| PTM | Style | Surface | Display | SNO: W_52 |
| Flank: W_46~58 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 46 | A | >10 | C | 31 | - |
| 47 | G | >10 | C | 38 | - | |
| 48 | A | >10 | C | 87 | - | |
| 49 | N | >10 | C | 28 | - | |
| 50 | V | 8.532 | C | 64 | - | |
| 51 | G | 6.162 | C | 18 | - | |
| Center | 52 | C | - | C | 34 | - |
| +6 | 53 | G | 4.591 | C | 47 | - |
| 54 | R | 6.717 | C | 209 | - | |
| 55 | D | 6.331 | C | 82 | ||
| 56 | H | 3.798 | C | 69 | - | |
| 57 | T | 4.385 | C | 12 | - | |
| 58 | L | 3.952 | C | 0 | - | |
| Other site of 14 | 39 | Q | 6.559 | C | 5 | |
| 44 | F | 6.845 | C | 40 | ||
| 40 | R | 7.079 | C | 202 | - | |
| 59 | F | 7.113 | E | 75 | - | |
| 33 | G | 7.927 | C | 1 | - | |
| 45 | H | 8.273 | C | 20 | ||
| 38 | R | 8.589 | C | 171 | - | |
| 60 | A | 8.883 | E | 1 | - | |
| 34 | S | 8.892 | E | 4 | - | |
| 43 | K | 8.941 | C | 50 | - | |
| 35 | I | 9.248 | E | 78 | - | |
| 32 | A | 9.356 | E | 1 | - | |
| 41 | G | 9.758 | C | 9 | - | |
| 37 | V | 9.835 | C | 124 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.798 | 56 | H | C | 69 | ||
| 3.952 | 58 | L | C | 0 | ||
| 4.385 | 57 | T | C | 12 | ||
| TOP 3 |