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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3J5U
Chain: D
Site: 5
Chain: D
Site: 5
| PTM | Style | Surface | Display | SNO: D_5 |
| Flank: D_-1~11 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | - | |||||
| 0 | >10 | - | ||||
| 1 | A | >10 | C | 61 | - | |
| 2 | V | 9.711 | E | 77 | - | |
| 3 | V | 6.457 | E | 70 | ||
| 4 | K | 5.216 | E | 166 | - | |
| Center | 5 | C | - | C | 21 | - |
| +6 | 6 | K | 6.178 | C | 165 | - |
| 7 | P | 8.499 | C | 80 | - | |
| 8 | T | 8.968 | C | 111 | ||
| 9 | S | >10 | C | 56 | - | |
| 10 | P | >10 | C | 122 | - | |
| 11 | G | >10 | C | 22 | - | |
| Other site of 9 | 15 | V | 5.349 | C | 6 | |
| 17 | K | 5.676 | E | 96 | ||
| 16 | V | 5.816 | E | 33 | - | |
| 12 | R | 6.48 | C | 102 | ||
| 13 | R | 7.101 | C | 139 | - | |
| 14 | H | 8.103 | C | 131 | - | |
| 205 | G | 8.683 | C | 15 | - | |
| 18 | V | 9.329 | E | 52 | - | |
| 204 | L | 9.573 | C | 61 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 5.216 | 4 | K | E | 166 | ||
| 5.349 | 15 | V | C | 6 | ||
| 5.676 | 17 | K | E | 96 | ||
| TOP 3 |