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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3J5W
Chain: D
Site: 5
Chain: D
Site: 5
| PTM | Style | Surface | Display | SNO: D_5 |
| Flank: D_-1~11 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | - | |||||
| 0 | >10 | - | ||||
| 1 | A | >10 | C | 59 | - | |
| 2 | V | 9.761 | E | 78 | - | |
| 3 | V | 6.486 | E | 69 | ||
| 4 | K | 5.207 | E | 164 | - | |
| Center | 5 | C | - | C | 23 | - |
| +6 | 6 | K | 6.164 | C | 165 | - |
| 7 | P | 8.513 | C | 78 | - | |
| 8 | T | 8.883 | C | 109 | ||
| 9 | S | >10 | C | 57 | - | |
| 10 | P | >10 | C | 122 | - | |
| 11 | G | >10 | C | 24 | - | |
| Other site of 9 | 15 | V | 5.374 | C | 8 | |
| 17 | K | 5.757 | E | 99 | ||
| 16 | V | 5.86 | E | 32 | - | |
| 12 | R | 6.445 | C | 102 | ||
| 13 | R | 7.056 | C | 138 | - | |
| 14 | H | 8.103 | C | 130 | - | |
| 205 | G | 8.721 | C | 16 | - | |
| 18 | V | 9.397 | E | 53 | - | |
| 204 | L | 9.634 | C | 62 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 5.207 | 4 | K | E | 164 | ||
| 5.374 | 15 | V | C | 8 | ||
| 5.757 | 17 | K | E | 99 | ||
| TOP 3 |