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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3KER
Chain: D
Site: 56
Chain: D
Site: 56
| PTM | Style | Surface | Display | SNO: D_56 |
| Flank: D_50~62 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 50 | N | 8.445 | C | 109 | - |
| 51 | K | 9.439 | C | 195 | - | |
| 52 | S | 7.347 | E | 22 | ||
| 53 | T | 5.751 | C | 94 | - | |
| 54 | E | 6.055 | C | 103 | - | |
| 55 | P | 4.904 | C | 62 | - | |
| Center | 56 | C | - | C | 0 | - |
| +6 | 57 | A | 4.855 | E | 0 | - |
| 58 | H | 7.323 | E | 41 | ||
| 59 | L | >10 | E | 1 | - | |
| 60 | L | >10 | E | 18 | - | |
| 61 | V | >10 | E | 0 | - | |
| 62 | S | >10 | E | 16 | - | |
| Other site of 14 | 47 | L | 4.61 | C | 16 | |
| 49 | M | 4.986 | E | 13 | ||
| 48 | L | 5.066 | C | 113 | - | |
| 94 | R | 5.748 | H | 6 | ||
| 8 | N | 5.976 | C | 31 | ||
| 7 | T | 6.261 | E | 0 | ||
| 95 | I | 6.993 | E | 6 | - | |
| 46 | T | 7.891 | C | 142 | - | |
| 9 | L | 8.252 | C | 15 | ||
| 96 | V | 8.704 | E | 60 | ||
| 6 | E | 8.758 | E | 49 | - | |
| 93 | D | 9.201 | H | 89 | - | |
| 45 | M | 9.206 | C | 81 | - | |
| 90 | L | 9.531 | C | 18 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.61 | 47 | L | C | 16 | ||
| 4.855 | 57 | A | E | 0 | ||
| 4.904 | 55 | P | C | 62 | ||
| TOP 3 |