dbSNO

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

PDB ID: 3KMF
Chain: G
Site: 693


	PTM	Style	Surface	Display
SNO: G_693
Flank: G_687~699
Other chain
Other site
All protein
Other Function
Chain		B-factor
Charge		Ligand

Main
Special Amino Acid Count
Other site annotation(Features)

	PDB site	Amino Acid	Distance(A)	Secondary Structure	Accessible surface area	Side Chian Angle
-6	687	T	>10	H	116	-
	688	L	>10	H	61	-
	689	S	7.453	H	0
	690	E	5.89	H	106	-
	691	L	7.493	H	54	-
	692	H	6.51	H	33	-
Center	693	C	-	H	11	-
+6	694	D	4.407	H	50
	695	K	7.812	C	188	-
	696	L	8.232	C	76	-
	697	H	6.475	C	89	-
	698	V	7.995	C	20	-
	699	D	8.59	C	1	-
Other site of 7	745	Y	4.086	C	28
	746	H	4.943	C	115
	744	K	6.64	C	119	-
	742	A	8.126	H	14	-
	700	P	8.948	C	0
	743	H	9.188	C	111	-
	741	L	9.988	H	23	-

Show

Neighbor Amino Acid Top 3
Distance(A)	PDB site	Amino Acid	Secondary Structure	Accessible surface area	Side Chian Angle	Single
4.086	745	Y	C	28
4.407	694	D	H	50
4.943	746	H	C	115

TOP 3

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Modified residue	2	-92	Outside Of PDB File	N-pyruvate 2-iminyl-valine; in Hb A1b
Modified residue	60	-34	Outside Of PDB File	N6-acetyllysine
Modified residue	83	-11	Outside Of PDB File	N6-acetyllysine
Modified residue	94	0	Outside Of PDB File	S-nitrosocysteine
Modified residue	145	51	Outside Of PDB File	N6-acetyllysine; alternate
Glycosylation	2	-92	Outside Of PDB File	N-linked (Glc) (glycation); in Hb A1c
Glycosylation	9	-85	Outside Of PDB File	N-linked (Glc) (glycation)
Glycosylation	18	-76	Outside Of PDB File	N-linked (Glc) (glycation)
Glycosylation	67	-27	Outside Of PDB File	N-linked (Glc) (glycation)
Glycosylation	121	27	Outside Of PDB File	N-linked (Glc) (glycation)
Glycosylation	145	51	Outside Of PDB File	N-linked (Glc) (glycation); alternate

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Metal binding	64	-30	Outside Of PDB File	Iron (heme distal ligand)
Metal binding	93	-1	Outside Of PDB File	Iron (heme proximal ligand)

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Binding site	2	-92	Outside Of PDB File	2,3-bisphosphoglycerate; via amino nitrogen
Binding site	3	-91	Outside Of PDB File	2,3-bisphosphoglycerate
Binding site	83	-11	Outside Of PDB File	2,3-bisphosphoglycerate
Binding site	144	50	Outside Of PDB File	2,3-bisphosphoglycerate

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