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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3NBY
Chain: C
Site: 112
Chain: C
Site: 112
| PTM | Style | Surface | Display | SNO: C_112 |
| Flank: C_106~118 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 106 | R | 9.45 | H | 22 | - |
| 107 | D | 7.859 | H | 38 | - | |
| 108 | L | 4.57 | H | 3 | ||
| 109 | V | 4.866 | H | 51 | - | |
| 110 | R | 6.611 | C | 53 | - | |
| 111 | V | 4.2 | C | 16 | ||
| Center | 112 | C | - | C | 9 | - |
| +6 | 113 | E | 6.495 | C | 145 | - |
| 114 | N | 7.476 | C | 151 | - | |
| 115 | I | 6.364 | C | 23 | ||
| 116 | P | 9.242 | C | 31 | - | |
| 117 | I | 9.135 | E | 16 | ||
| 118 | V | >10 | E | 0 | - | |
| Other site of 14 | 83 | A | 4.828 | C | 10 | |
| 80 | Y | 5.193 | H | 2 | - | |
| 81 | I | 6.209 | C | 3 | - | |
| 82 | Q | 6.738 | C | 93 | - | |
| 84 | Q | 6.977 | C | 92 | - | |
| 85 | C | 7.165 | E | 0 | - | |
| 86 | A | 7.665 | E | 0 | ||
| 14 | V | 7.84 | E | 0 | ||
| 77 | D | 8.164 | H | 20 | - | |
| 105 | H | 8.933 | H | 23 | - | |
| 79 | Y | 8.968 | H | 0 | - | |
| 13 | L | 9.165 | E | 0 | - | |
| 78 | G | 9.889 | H | 7 | - | |
| 12 | K | 9.961 | E | 21 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.2 | 111 | V | C | 16 | ||
| 4.57 | 108 | L | H | 3 | ||
| 4.828 | 83 | A | C | 10 | ||
| TOP 3 |