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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3QFB
Chain: D
Site: 62
Chain: D
Site: 62
| PTM | Style | Surface | Display | SNO: D_62 |
| Flank: D_56~68 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 56 | E | 8.323 | E | 18 | - |
| 57 | V | 5.191 | E | 0 | - | |
| 58 | D | 5.195 | E | 21 | - | |
| 59 | V | 6.404 | C | 0 | - | |
| 60 | D | 7.032 | C | 34 | - | |
| 61 | D | 4.58 | C | 102 | - | |
| Center | 62 | C | - | C | 1 | - |
| +6 | 63 | Q | 6.542 | H | 58 | - |
| 64 | D | 7.492 | H | 77 | ||
| 65 | V | 6.275 | H | 2 | ||
| 66 | A | 7.821 | H | 1 | ||
| 67 | S | >10 | H | 55 | - | |
| 68 | E | >10 | H | 101 | - | |
| Other site of 9 | 6 | E | 3.397 | C | 150 | - |
| 7 | S | 5.142 | C | 40 | - | |
| 5 | I | 5.411 | E | 11 | - | |
| 8 | K | 7.225 | C | 102 | - | |
| 4 | Q | 7.978 | E | 100 | - | |
| 11 | F | 8.659 | H | 5 | - | |
| 10 | A | 8.74 | H | 44 | ||
| 27 | F | 9.227 | E | 0 | ||
| 9 | T | 9.891 | H | 99 | - |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 3.397 | 6 | E | C | 150 | ||
| 4.58 | 61 | D | C | 102 | ||
| 5.142 | 7 | S | C | 40 | ||
| TOP 3 |