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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 3VYY
Chain: A
Site: 12
Chain: A
Site: 12
| PTM | Style | Surface | Display | SNO: A_12 |
| Flank: A_6~18 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 6 | N | 9.467 | H | 117 | - |
| 7 | F | 8.377 | H | 40 | - | |
| 8 | L | 5.073 | H | 0 | ||
| 9 | Y | 4.972 | H | 132 | - | |
| 10 | A | 6.554 | H | 54 | - | |
| 11 | W | 5.031 | H | 8 | ||
| Center | 12 | C | - | H | 0 | - |
| +6 | 13 | G | 6.21 | H | 44 | - |
| 14 | K | 7.993 | H | 150 | - | |
| 15 | R | 7.527 | C | 108 | ||
| 16 | K | 8.034 | C | 190 | - | |
| 17 | M | 5.958 | C | 55 | ||
| 18 | T | 5.162 | C | 91 | - | |
| Other site of 11 | 19 | P | 4.62 | C | 11 | |
| 40 | V | 5.695 | C | 7 | ||
| 41 | E | 8.123 | C | 158 | - | |
| 39 | Q | 8.169 | E | 94 | - | |
| 20 | S | 8.34 | E | 66 | - | |
| 5 | K | 9.21 | H | 53 | - | |
| 66 | V | 9.268 | H | 0 | - | |
| 38 | V | 9.44 | E | 0 | ||
| 65 | F | 9.491 | H | 0 | ||
| 62 | A | 9.583 | H | 0 | ||
| 43 | Y | 9.821 | C | 51 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 4.62 | 19 | P | C | 11 | ||
| 4.972 | 9 | Y | H | 132 | ||
| 5.031 | 11 | W | H | 8 | ||
| TOP 3 |