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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 4DHI
Chain: D
Site: 87
Chain: D
Site: 87
| PTM | Style | Surface | Display | SNO: D_87 |
| Flank: D_81~93 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 81 | D | 8.951 | C | 64 | |
| 82 | K | >10 | C | 205 | - | |
| 83 | L | >10 | C | 95 | - | |
| 84 | G | >10 | C | 7 | - | |
| 85 | R | 8.784 | C | 141 | - | |
| 86 | I | 6.45 | E | 10 | - | |
| Center | 87 | C | - | C | 21 | - |
| +6 | 88 | L | 5.146 | C | 19 | - |
| 89 | D | 6.775 | H | 73 | ||
| 90 | I | 9.972 | H | 36 | - | |
| 91 | L | 9.303 | H | 19 | - | |
| 92 | K | 8.973 | C | 95 | ||
| 93 | D | >10 | C | 70 | - | |
| Other site of 12 | 121 | L | 5.52 | C | 87 | |
| 79 | N | 5.622 | C | 7 | ||
| 119 | D | 5.972 | C | 12 | ||
| 120 | P | 7.405 | C | 125 | ||
| 80 | V | 7.903 | E | 17 | - | |
| 122 | A | 8.151 | C | 86 | - | |
| 78 | P | 8.397 | C | 2 | - | |
| 116 | N | 8.966 | C | 71 | ||
| 123 | N | 9.174 | C | 59 | ||
| 117 | P | 9.199 | C | 23 | - | |
| 118 | D | 9.484 | C | 120 | - | |
| 126 | A | 9.995 | H | 1 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 5.146 | 88 | L | C | 19 | ||
| 5.52 | 121 | L | C | 87 | ||
| 5.622 | 79 | N | C | 7 | ||
| TOP 3 |