dbSNO

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

PDB ID: 4IBM
Chain: B
Site: 1138


	PTM	Style	Surface	Display
SNO: B_1138
Flank: B_1132~1144
Other chain
Other site
All protein
Other Function
Chain		B-factor
Charge		Ligand

	PDB site	Amino Acid	Distance(A)	Secondary Structure	Accessible surface area	Side Chian Angle
-6	1132	D	9.372	C	32	-
	1133	L	6.13	C	0
	1134	A	5.529	C	0	-
	1135	A	4.721	H	0	-
	1136	R	6.722	H	0	-
	1137	N	5.048	H	10	-
Center	1138	C	-	E	0	-
+6	1139	M	6.171	E	31	-
	1140	V	8.587	E	1	-
	1141	A	>10	C	11	-
	1142	H	>10	C	144	-
	1143	D	>10	C	100	-
	1144	F	>10	C	69	-
Other site of 21	1148	I	4.719	E	0	-
	1116	I	5.735	H	0
	1147	K	6.022	E	10	-
	1149	G	6.179	C	3	-
	1084	L	6.499	H	0
	1146	V	6.852	E	1
	1198	V	6.981	H	0
	1083	D	7.982	E	16	-
	1195	F	8.084	H	0	-
	1085	K	8.563	H	0	-
	1112	M	8.732	H	15
	1117	A	8.796	H	0	-
	1119	G	8.811	H	0	-
	1115	E	8.846	H	11	-
	1113	A	8.874	H	1	-
	1120	M	8.896	H	0
	1059	V	9.059	E	2	-
	1058	H	9.461	C	1	-
	1199	L	9.531	H	4	-
	1194	S	9.759	H	6	-
	1150	D	9.873	C	10	-

Show

Neighbor Amino Acid Top 3
Distance(A)	PDB site	Amino Acid	Secondary Structure	Accessible surface area	Side Chian Angle	Single
4.719	1148	I	E	0
4.721	1135	A	H	0
5.048	1137	N	H	10

TOP 3

Amino acid modifications

Amino acid modifications image of Seq Distance (Amino Acid) of Cysteine:

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Modified residue	400	-765	Outside Of PDB File	Phosphoserine
Modified residue	401	-764	Outside Of PDB File	Phosphotyrosine
Modified residue	407	-758	Outside Of PDB File	Phosphoserine
Modified residue	999	-166	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Modified residue	1185	20		Phosphotyrosine; by autocatalysis
Modified residue	1189	24		Phosphotyrosine; by autocatalysis
Modified residue	1190	25		Phosphotyrosine; by autocatalysis
Modified residue	1355	190	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Modified residue	1361	196	Outside Of PDB File	Phosphotyrosine; by autocatalysis
Glycosylation	43	-1122	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	52	-1113	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	138	-1027	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	242	-923	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	282	-883	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	364	-801	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	424	-741	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	445	-720	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	541	-624	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	769	-396	Outside Of PDB File	N-linked (GlcNAc...)
Glycosylation	920	-245	Outside Of PDB File	N-linked (GlcNAc...)
Disulfide bond	35<-->53	-1130<-->-1112	Outside Of PDB File
Disulfide bond	153<-->182	-1012<-->-983	Outside Of PDB File
Disulfide bond	186<-->209	-979<-->-956	Outside Of PDB File
Disulfide bond	196<-->215	-969<-->-950	Outside Of PDB File
Disulfide bond	219<-->228	-946<-->-937	Outside Of PDB File
Disulfide bond	223<-->234	-942<-->-931	Outside Of PDB File
Disulfide bond	235<-->243	-930<-->-922	Outside Of PDB File
Disulfide bond	239<-->252	-926<-->-913	Outside Of PDB File
Disulfide bond	255<-->264	-910<-->-901	Outside Of PDB File
Disulfide bond	268<-->280	-897<-->-885	Outside Of PDB File
Disulfide bond	286<-->311	-879<-->-854	Outside Of PDB File
Disulfide bond	293<-->301	-872<-->-864	Outside Of PDB File
Disulfide bond	315<-->328	-850<-->-837	Outside Of PDB File
Disulfide bond	331<-->335	-834<-->-830	Outside Of PDB File
Disulfide bond	339<-->360	-826<-->-805	Outside Of PDB File
Disulfide bond	462<-->495	-703<-->-670	Outside Of PDB File
Disulfide bond	551	-614	Outside Of PDB File
Disulfide bond	674<-->899	-491<-->-266	Outside Of PDB File
Disulfide bond	825<-->834	-340<-->-331	Outside Of PDB File

Binding site

Binding site image of Seq Distance (Amino Acid) of Cysteine:

Feature Key	Seq Position	Seq Distance (Amino Acid) of Cysteine	Space Distance(A)	Description
Binding site	1033	-132		ATP
Binding site	1057	-108		ATP
Binding site	1177	12		ATP

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