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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 4KOD
Chain: H
Site: 105
Chain: H
Site: 105
| PTM | Style | Surface | Display | SNO: H_105 |
| Flank: H_99~111 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 99 | V | >10 | E | 44 | - |
| 100 | I | >10 | E | 2 | - | |
| 101 | S | >10 | E | 25 | - | |
| 102 | I | >10 | E | 0 | - | |
| 103 | Q | 7.753 | E | 62 | ||
| 104 | P | 6.054 | E | 67 | - | |
| Center | 105 | C | - | C | 2 | - |
| +6 | 106 | P | 5.536 | C | 96 | - |
| 107 | D | 5.293 | C | 105 | ||
| 108 | V | 5.267 | C | 17 | ||
| 109 | K | 9.07 | C | 140 | - | |
| 110 | Y | >10 | E | 119 | - | |
| 111 | G | >10 | C | 4 | - | |
| Other site of 12 | 58 | L | 5.141 | E | 9 | |
| 57 | V | 5.701 | E | 0 | - | |
| 56 | T | 6.748 | E | 19 | ||
| 68 | V | 6.935 | E | 4 | ||
| 173 | Y | 7.826 | E | 52 | ||
| 174 | C | 8.764 | E | 0 | - | |
| 69 | C | 8.838 | E | 4 | - | |
| 59 | L | 8.921 | E | 0 | - | |
| 145 | P | 9.163 | E | 3 | - | |
| 67 | A | 9.338 | E | 2 | - | |
| 55 | D | 9.666 | C | 45 | ||
| 172 | P | 9.991 | C | 48 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 5.141 | 58 | L | E | 9 | ||
| 5.267 | 108 | V | C | 17 | ||
| 5.293 | 107 | D | C | 105 | ||
| TOP 3 |