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Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.
PDB ID: 4KOD
Chain: I
Site: 105
Chain: I
Site: 105
| PTM | Style | Surface | Display | SNO: I_105 |
| Flank: I_99~111 | ||||
| Other chain | ||||
| Other site | ||||
| All protein | ||||
| Other Function | ||||
| Chain | B-factor | |||
| Charge | Ligand | |||
| PDB site | Amino Acid | Distance(A) | Secondary Structure | Accessible surface area | Side Chian Angle | |
| -6 | 99 | V | >10 | E | 38 | - |
| 100 | I | >10 | E | 2 | - | |
| 101 | S | >10 | E | 23 | - | |
| 102 | I | >10 | E | 1 | - | |
| 103 | Q | 7.725 | E | 63 | ||
| 104 | P | 6.052 | E | 71 | - | |
| Center | 105 | C | - | C | 3 | - |
| +6 | 106 | P | 5.499 | C | 100 | - |
| 107 | D | 5.292 | C | 102 | ||
| 108 | V | 5.273 | C | 18 | ||
| 109 | K | 9.069 | C | 139 | - | |
| 110 | Y | >10 | E | 112 | - | |
| 111 | G | >10 | C | 4 | - | |
| Other site of 11 | 58 | L | 5.124 | E | 10 | - |
| 57 | V | 5.571 | E | 0 | - | |
| 56 | T | 6.553 | E | 19 | ||
| 68 | V | 6.848 | E | 4 | ||
| 173 | Y | 7.826 | E | 50 | ||
| 69 | C | 8.663 | E | 3 | - | |
| 174 | C | 8.782 | E | 0 | - | |
| 59 | L | 8.867 | E | 0 | - | |
| 145 | P | 8.998 | E | 3 | - | |
| 67 | A | 9.315 | E | 2 | - | |
| 55 | D | 9.503 | C | 35 |
| Show | |
| Neighbor Amino Acid Top 3 | ||||||
| Distance(A) | PDB site | Amino Acid | Secondary Structure | Accessible surface area | Side Chian Angle | Single |
| 5.124 | 58 | L | E | 10 | ||
| 5.273 | 108 | V | C | 18 | ||
| 5.292 | 107 | D | C | 102 | ||
| TOP 3 |