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Protein Name: Tripartite motif-containing protein 5

UniprotKB/SwissProt ID: TRIM5_HUMAN (Q9C035)

Gene Name: TRIM5

Synonyms: RNF88

Organism: Homo sapiens (Human).

Function: Capsid-specific restriction factor that prevents infection from non-host-adapted retroviruses. Blocks viral replication early in the life cycle, after viral entry but before reverse transcription. In addition to acting as a capsid-specific restriction factor, also acts as a pattern recognition receptor that activates innate immune signaling in response to the retroviral capsid lattice. Binding to the viral capsid triggers its E3 ubiquitin ligase activity, and in concert with the heterodimeric ubiquitin conjugating enzyme complex UBE2V1-UBE2N (also known as UBC13-UEV1A complex) generates 'Lys-63'-linked polyubiquitin chains, which in turn are catalysts in the autophosphorylation of the MAP3K7/TAK1 complex (includes TAK1, TAB2, and TAB3). Activation of the MAP3K7/TAK1 complex by autophosphorylation results in the induction and expression of NF- kappa-B and MAPK-responsive inflammatory genes, thereby leading to an innate immune response in the infected cell. Restricts infection by N-tropic murine leukemia virus (N-MLV) and equine infectious anemia virus (EIAV).

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Cytoplasm, P-body. Note=Closely associates with proteasomal subunits in cytoplasmic bodies (By similarity). Colocalizes with SQSTM1 in cytoplasmic bodies.

PDB :
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Graphical Visualization of Ubiquitination Sites:
Overview of Protein Ubiquitination Sites with Functional and Structural Information
InterPro ID Domain
IPR000315
IPR001841
IPR001870
IPR003877
IPR003879
IPR013083


The ubiquitination sites of TRIM5_HUMAN

No. Position Ubiquitinated Peptide Secondary Structure Solvent Accessibility Substrate Motifs PubMed ID
1178TQIQYD K TNVLAD HHHHHH H HHHHHH 36.74%21906983
2212EEEDIL K SLTNSE HHHHHH H HHHHHH 43.69%21906983
3255GVDGVI K RTENVT HHHHHH H HHHHCC 51.35%21906983
4282FRAPDL K GMLEVF CCCCCH H HHHHHH 50.05%21906983
5324RQVSSP K PQIIYG CEEEEC C CCCCCC 52.05%2189047

The interacting network mediated by proteins: TRIM5_HUMAN

Metabolic pathway:
Kegg map ID Pathway
map03008Ribosome biogenesis in eukaryotes