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Protein Name: E3 ubiquitin-protein ligase UHRF1

UniprotKB/SwissProt ID: UHRF1_HUMAN (Q96T88)

Gene Name: UHRF1

Synonyms: ICBP90, NP95, RNF106

Organism: Homo sapiens (Human).

Function: Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits DNMT1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD- type zinc fingers, specifically recognizes and binds histone H3 trimethylated at 'Lys-9' (H3K9me3) and unmethylated at 'Arg-2' (H3R2me0), respectively, and recruits chromatin proteins. Enriched in pericentric heterochromatin where it recruits different chromatin modifiers required for this chromatin replication. Also localizes to euchromatic regions where it negatively regulates transcription possibly by impacting DNA methylation and histone modifications. Has E3 ubiquitin-protein ligase activity by mediating the ubiquitination of target proteins such as histone H3 and PML. It is still unclear how E3 ubiquitin-protein ligase activity is related to its role in chromatin in vivo. May be involved in DNA repair.

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization: Nucleus. Note=Localizes to replication foci. Enriched in pericentric heterochromatin. Also localizes to euchromatic regions.

PDB :
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Graphical Visualization of Ubiquitination Sites:
Overview of Protein Ubiquitination Sites with Functional and Structural Information
InterPro ID Domain
IPR000626
IPR001841
IPR001965
IPR003105
IPR011011
IPR013083


The ubiquitination sites of UHRF1_HUMAN

No. Position Ubiquitinated Peptide Secondary Structure Solvent Accessibility Substrate Motifs PubMed ID
150RLFYRG K QMEDGH HHHHCC C EECCCC 37.16%21890473
284VLPHST K ERDSEL CCCCCC C CCCCCC 54.49%21906983
3136TELGLY K VNEYVD CCCCEE E HHHHHH 43.56%21906983
4233YNPDNP K ERGFWY ECCCCC C CCCCEE 67.32%21906983
5385ESKKKA K MASATS CCCCCC C HHCCCC 43.83%17370265
6385ESKKKA K MASATS CCCCCC C HHCCCC 43.83%17370265
7560RYDGIY K VVKYWP EECCEE E EEEEEE 38.33%21890473
8563GIYKVV K YWPEKG CEEEEE E EEECCC 44.58%21906983
9570YWPEKG K SGFLVW EEECCC C CCCEEE 59.48%21890473
10592EPGPWT K EGKDRI CCCCHH H HHHHHH 61.68%21906983
11600GKDRIK K LGLTMQ HHHHHH C CCCEEE 45.47%21890473
12626REKENS K REEEEQ CCCCCC C CCCCHH 75.34%21906983
13670RTSKKT K VEPYSL HHCCCC C CCCCCC 54.18%21906983
14692EDKSNA K LWNEVL CCCCCH H HHHHHH 59.28%21890473

The interacting network mediated by proteins: UHRF1_HUMAN

Metabolic pathway:
Kegg map ID Pathway
map03008Ribosome biogenesis in eukaryotes