dbSNO 2.0

Latest news:

Sep. 10, 2014:
A total of 174 experimentally verified S-nitrosylation sites on 94 S-nitrosylated proteins from individualized human colorectal cancer tissues using a label-free quantitation strategy.

Protein Name: 50S ribosomal protein L28

UniprotKB/SwissProt ID: RL28_ECOLI (P0A7M2)

Gene Name: rpmB

Organism: Escherichia coli (strain K12).

Function:

Other Modifications: View all modification sites in dbPTM

Protein Subcellular Localization:

PDB :
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Graphical Visualization of S-nitrosylation Sites:

Overview of Protein S-nitrosylation Sites with Functional and Structural Information

InterPro ID	Domain
IPR001383

3D Structure Databases:


3D structure databases
Entry	Method	Resolution (A)	Chain	Positions	View
1VT2	X-ray	3.30 A	X	1-78	Link
2I2T	X-ray	3.22 A	X	2-77	Link
2I2V	X-ray	3.22 A	X	2-77	Link
2QAM	X-ray	3.21 A	Z	1-78	Link
2QAO	X-ray	3.21 A	Z	1-78	Link
2QBA	X-ray	3.54 A	Z	1-78	Link
2QBC	X-ray	3.54 A	Z	1-78	Link
2QBE	X-ray	3.30 A	Z	1-78	Link
2QBG	X-ray	3.30 A	Z	1-78	Link
2QBI	X-ray	4.00 A	Z	1-78	Link
2QBK	X-ray	4.00 A	Z	1-78	Link
2QOV	X-ray	3.93 A	Z	1-78	Link
2QOX	X-ray	3.93 A	Z	1-78	Link
2QOZ	X-ray	3.50 A	Z	1-78	Link
2QP1	X-ray	3.50 A	Z	1-78	Link
2WWQ	EM	5.80 A	0	2-78	Link
2Z4L	X-ray	4.45 A	Z	1-78	Link
2Z4N	X-ray	4.45 A	Z	1-78	Link
3DF2	X-ray	3.50 A	Z	1-78	Link
3DF4	X-ray	3.50 A	Z	1-78	Link
3FIK	EM	6.70 A	X	2-78	Link
3I1N	X-ray	3.19 A	X	1-78	Link
3I1P	X-ray	3.19 A	X	1-78	Link
3I1R	X-ray	3.81 A	X	1-78	Link
3I1T	X-ray	3.81 A	X	1-78	Link
3I20	X-ray	3.71 A	X	1-78	Link
3I22	X-ray	3.71 A	X	1-78	Link
3IZT	EM	-	Y	1-78	Link
3IZU	EM	-	Y	1-78	Link
3J01	EM	-	X	2-78	Link
3J0T	EM	12.10 A	Z	2-77	Link
3J0W	EM	14.70 A	Z	2-77	Link
3J0Y	EM	13.50 A	Z	2-77	Link
3J11	EM	13.10 A	Z	2-77	Link
3J12	EM	11.50 A	Z	2-77	Link
3J14	EM	11.50 A	Z	2-77	Link
3J19	EM	8.30 A	X	2-78	Link
3J37	EM	9.80 A	1	2-78	Link
3J4X	EM	12.00 A	X	1-78	Link
3J50	EM	20.00 A	X	1-78	Link
3J51	EM	17.00 A	X	1-78	Link
3J52	EM	12.00 A	X	1-78	Link
3J54	EM	13.00 A	X	1-78	Link
3J56	EM	15.00 A	X	1-78	Link
3J58	EM	17.00 A	X	1-78	Link
3J5A	EM	12.00 A	X	1-78	Link
3J5C	EM	17.00 A	X	1-78	Link
3J5E	EM	17.00 A	X	1-78	Link
3J5G	EM	20.00 A	X	1-78	Link
3J5I	EM	15.00 A	X	1-78	Link
3J5K	EM	9.00 A	X	1-78	Link
3J5O	EM	6.80 A	X	1-78	Link
3J5U	EM	7.60 A	Z	2-78	Link
3J5W	EM	7.60 A	1	2-78	Link
3KCR	EM	-	X	1-78	Link
3OAS	X-ray	3.25 A	X	2-78	Link
3OAT	X-ray	3.25 A	X	2-78	Link
3OFC	X-ray	3.19 A	X	2-78	Link
3OFD	X-ray	3.19 A	X	2-78	Link
3OFQ	X-ray	3.10 A	X	2-78	Link
3OFR	X-ray	3.10 A	X	2-78	Link
3OFZ	X-ray	3.29 A	X	2-78	Link
3OG0	X-ray	3.29 A	X	2-78	Link
3ORB	X-ray	3.30 A	X	1-78	Link
3R8S	X-ray	3.00 A	X	2-78	Link
3R8T	X-ray	3.00 A	X	2-78	Link
3SGF	X-ray	3.20 A	1	1-78	Link
3UOS	X-ray	3.70 A	1	1-78	Link
4GAR	X-ray	3.30 A	X	1-78	Link
4GAU	X-ray	3.30 A	X	1-78	Link
4KIX	X-ray	2.90 A	X	1-78	Link
4KIZ	X-ray	2.90 A	X	1-78	Link
4KJ1	X-ray	2.90 A	X	1-78	Link
4KJ3	X-ray	2.90 A	X	1-78	Link
4KJ5	X-ray	2.90 A	X	1-78	Link
4KJ7	X-ray	2.90 A	X	1-78	Link
4KJ9	X-ray	2.90 A	X	1-78	Link
4KJB	X-ray	2.90 A	X	1-78	Link

The S-nitrosylation sites of RL28_ECOLI

No.	Position	S-nitrosylated Peptide	Secondary Structure of S-nitrosylated Peptide	Solvent Accessibility of nitrosylated Site	Substrate Motifs	PubMed ID	Experiment
1	5	------MSRV C QVTGKRPVTG	------CCCC C CCCCCCCCCC	2.33%	EC02	22178444	-
2	5	------MSRV C QVTGKRPVTG	------CCCC C CCCCCCCCCC	2.33%	EC02	19483679	in vitro

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